RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 TUBG1P23258 451 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 IGFBP5P24593 272 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 WNT5AP41221 380 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 PPOXP50336 477 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 SELENOVP59797 346 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 ECH1Q13011 328 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 PCK2Q16822 640 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 MSMPQ1L6U9 139 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 TEX30Q5JUR7 227 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 ELFN2Q5R3F8 820 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 LINC01590Q5TEZ4 76 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 OR51L1Q8NGJ5 315 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 COQ7Q99807 217 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 HCAR1Q9BXC0 346 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 MRPL37Q9BZE1 423 aaKnown RBP13.15□□□□□ -0.3
SDC3-203ENST00000471567 TUBG2Q9NRH3 451 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 TBCCD1Q9NVR7 557 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 TVP23BQ9NYZ1 205 aa13.15□□□□□ -0.3
SDC3-203ENST00000471567 GDF2Q9UK05 429 aaPredicted RBP13.15□□□□□ -0.3
SDC3-203ENST00000471567 TVP23AA6NH52 213 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 ZAR1LA6NP61 321 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 J3QW42 95 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 PRODHO43272 600 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 GLCEO94923 617 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 IGHV4-39P01824 125 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 CLUP10909 449 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 ENTPD1P49961 510 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 SNAPC1Q16533 368 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 SLX4IPQ5VYV7 408 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 PLBD1Q6P4A8 553 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 CORO6Q6QEF8 472 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 CPOQ8IVL8 374 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 LINC00346Q8IVM7 164 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 ZNF101Q8IZC7 436 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 ZNF511Q8NB15 262 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 WFDC11Q8NEX6 87 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 OR1J1Q8NGS3 322 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 OR6K6Q8NGW6 343 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 STMN2Q93045 179 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 OTULINQ96BN8 352 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 CIB1Q99828 191 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 OR51B6Q9H340 312 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 MED20Q9H944 212 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 MARCH7Q9H992 704 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 HINT3Q9NQE9 182 aaKnown RBP13.14□□□□□ -0.31
SDC3-203ENST00000471567 USE1Q9NZ43 259 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 COMMD3-BMI1R4GMX3 469 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 AKAP9Q99996 3911 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 ARFGEF3Q5TH69 2177 aa13.14□□□□□ -0.31
SDC3-203ENST00000471567 IGLV3-9A0A075B6K5 115 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 H3BSA7 217 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 ZNF593O00488 134 aaPredicted RBP13.13□□□□□ -0.31
SDC3-203ENST00000471567 ABHD16AO95870 558 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 GSTT1P30711 240 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 RGS6P49758 472 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 EFNA4P52798 201 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 PPP1CBP62140 327 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 MOGQ16653 247 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 ZNF718Q3SXZ3 478 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 SLC35D3Q5M8T2 416 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 C12orf73Q69YU5 71 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 CFAP77Q6ZQR2 320 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 CXXC5Q7LFL8 322 aaKnown RBP13.13□□□□□ -0.31
SDC3-203ENST00000471567 PQLC1Q8N2U9 271 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 ABHD4Q8TB40 342 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 SYNPRQ8TBG9 265 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 COG8Q96MW5 612 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 PITX2Q99697 317 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 GABARAPL3Q9BY60 117 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 OR51V1Q9H2C8 321 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 MS4A5Q9H3V2 200 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 WDR76Q9H967 626 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 DUSP13Q9UII6 198 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 GPR160Q9UJ42 338 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 GRIP1Q9Y3R0 1128 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 ITPR3Q14573 2671 aa13.13□□□□□ -0.31
SDC3-203ENST00000471567 M0R233 179 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 NDUFS7O75251 213 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 F12P00748 615 aaPredicted RBP13.12□□□□□ -0.31
SDC3-203ENST00000471567 NGFP01138 241 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 ALPLP05186 524 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 ERCC1P07992 297 aaPredicted RBP13.12□□□□□ -0.31
SDC3-203ENST00000471567 EPHA2P29317 976 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 ALDH3A2P51648 485 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 KLF3P57682 345 aaPredicted RBP13.12□□□□□ -0.31
SDC3-203ENST00000471567 ERVS71-1P61550 626 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 EFNB1P98172 346 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 KRTAP27-1Q3LI81 207 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 MBNL2Q5VZF2 373 aaKnown RBP13.12□□□□□ -0.31
SDC3-203ENST00000471567 LYPD4Q6UWN0 246 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 RFPL4BQ6ZWI9 263 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 LRP11Q86VZ4 500 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 SLC7A6Q92536 515 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 MARS2Q96GW9 593 aaKnown RBP13.12□□□□□ -0.31
SDC3-203ENST00000471567 MAP6Q96JE9 813 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 INTS14Q96SY0 518 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 ATF6BQ99941 703 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 VRK1Q99986 396 aaPredicted RBP13.12□□□□□ -0.31
SDC3-203ENST00000471567 SYT3Q9BQG1 590 aa13.12□□□□□ -0.31
SDC3-203ENST00000471567 C9orf16Q9BUW7 83 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms