RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 LILRB1Q8NHL6 650 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-207ENST00000471342 RGP1Q92546 391 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-207ENST00000471342 RORBQ92753 470 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 RNASE6Q93091 150 aaKnown RBP8.58□□□□□ -1.04
SF3A1-207ENST00000471342 RFKQ969G6 155 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 TMEM80Q96HE8 168 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 Q96MT0 163 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 DCLRE1CQ96SD1 692 aaKnown RBP8.58□□□□□ -1.04
SF3A1-207ENST00000471342 CNN2Q99439 309 aaKnown RBP8.58□□□□□ -1.04
SF3A1-207ENST00000471342 TBX5Q99593 518 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 ACOT13Q9NPJ3 140 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 G6PC2Q9NQR9 355 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 FAM206AQ9NX38 181 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 FBN2P35556 2912 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 TMEM129A0AVI4 362 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 FAM221AA4D161 298 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 DPRXA6NFQ7 191 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 EIF4E1BA6NMX2 242 aaKnown RBP8.57□□□□□ -1.04
SF3A1-207ENST00000471342 FAM90A27PA6NNH2 459 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 EEF1E1-BLOC1S5C9J1V9 151 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 OGG1O15527 345 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 EEF1E1O43324 174 aaKnown RBP8.57□□□□□ -1.04
SF3A1-207ENST00000471342 MRPS14O60783 128 aaKnown RBP8.57□□□□□ -1.04
SF3A1-207ENST00000471342 CBR1P16152 277 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 JUNBP17275 347 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-207ENST00000471342 KIR3DL2P43630 455 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 ZNF84P51523 738 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 GTF2A1P52655 376 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-207ENST00000471342 RPS11P62280 158 aaKnown RBP eCLIP8.57□□□□□ -1.04
SF3A1-207ENST00000471342 RAB1AP62820 205 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 MFGE8Q08431 387 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-207ENST00000471342 ACSM1Q08AH1 577 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 AQP6Q13520 282 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 SSX1Q16384 188 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 TIMM23BQ5SRD1 257 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 UBE2UQ5VVX9 321 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 ASPHD2Q6ICH7 369 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 DNM1P34Q6PK57 102 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 LRRN1Q6UXK5 716 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 PLEKHG7Q6ZR37 379 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 UBE2J2Q8N2K1 259 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 ACBD7Q8N6N7 88 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 SPRYD4Q8WW59 207 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-207ENST00000471342 IPCEF1Q8WWN9 437 aaPredicted RBP8.57□□□□□ -1.04
SF3A1-207ENST00000471342 ASB5Q8WWX0 329 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 TMIGD2Q96BF3 282 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 SLAMF6Q96DU3 332 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 PGLYRP3Q96LB9 341 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 OPALINQ96PE5 141 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 WACQ9BTA9 647 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 TTTY10Q9BZA0 68 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 ACTR6Q9GZN1 396 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 POFUT1Q9H488 388 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 Q9H521 79 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 CRIM1Q9NZV1 1036 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 GRIP1Q9Y3R0 1128 aa8.57□□□□□ -1.04
SF3A1-207ENST00000471342 HELZ2Q9BYK8 2649 aaKnown RBP8.57□□□□□ -1.04
SF3A1-207ENST00000471342 A0A1B0GTI1 187 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 DEFB108AA8MXU0 73 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 C16orf97H3BN30 126 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 INMTO95050 263 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 CLDN14O95500 239 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 RAB36O95755 333 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 SERPINA5P05154 406 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 SPARCP09486 303 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 ACSM4P0C7M7 580 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 CECR9P0C854 216 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 COX5BP10606 129 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 EPXP11678 715 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 DCTDP32321 178 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 TGFBR2P37173 567 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 CASP6P55212 293 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 EGR3Q06889 387 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 SPOCK1Q08629 439 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 POU4F2Q12837 409 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 EIF2B1Q14232 305 aaKnown RBP8.56□□□□□ -1.04
SF3A1-207ENST00000471342 RAB39AQ14964 217 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 TBCEQ15813 527 aaPredicted RBP8.56□□□□□ -1.04
SF3A1-207ENST00000471342 C3orf36Q3SXR2 165 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 TP53I3Q53FA7 332 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 KLHL22Q53GT1 634 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 ELFN2Q5R3F8 820 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 LCN1P1Q5VSP4 162 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 LIPNQ5VXI9 398 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 DMKNQ6E0U4 476 aaPredicted RBP8.56□□□□□ -1.04
SF3A1-207ENST00000471342 KRT80Q6KB66 452 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 XKRXQ6PP77 449 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 DEGS2Q6QHC5 323 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 KRT74Q7RTS7 529 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 SLC16A14Q7RTX9 510 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.56□□□□□ -1.04
SF3A1-207ENST00000471342 EGFL6Q8IUX8 553 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 ZNF101Q8IZC7 436 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 SYS1Q8N2H4 156 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 ZNF454Q8N9F8 522 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 OR52N1Q8NH53 320 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 LINC01560Q8TB33 94 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 MUL1Q969V5 352 aa8.56□□□□□ -1.04
SF3A1-207ENST00000471342 TRMT61AQ96FX7 289 aaKnown RBP8.56□□□□□ -1.04
SF3A1-207ENST00000471342 LYZL4Q96KX0 146 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms