RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 DOK2O60496 412 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 CST2P09228 141 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 SNRPBP14678 240 aaKnown RBP7.57□□□□□ -1.2
CCDC171-204ENST00000470191 HOXB9P17482 250 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-204ENST00000470191 FUT1P19526 365 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 KITLGP21583 273 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 CFHR2P36980 270 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 GUCA1AP43080 201 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-204ENST00000470191 DAP3P51398 398 aaKnown RBP7.57□□□□□ -1.2
CCDC171-204ENST00000470191 LOXL3P58215 753 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 GUCY1A3Q02108 690 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 DBPQ10586 325 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-204ENST00000470191 MPP2Q14168 576 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 ENDOGQ14249 297 aaKnown RBP7.57□□□□□ -1.2
CCDC171-204ENST00000470191 DUSP7Q16829 419 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 KRT71Q3SY84 523 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 ZNF404Q494X3 552 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 SAMD5Q5TGI4 173 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 FAM27BQ5VT28 67 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 DHRS7BQ6IAN0 325 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-204ENST00000470191 OR2T2Q6IF00 324 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 SLC25A47Q6Q0C1 308 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 HDDC2Q7Z4H3 204 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 IGFN1Q86VF2 1251 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 SLC30A8Q8IWU4 369 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 KIRREL3Q8IZU9 778 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 LYG1Q8N1E2 194 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 NPEPL1Q8NDH3 523 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 SGCDQ92629 289 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 OR52B2Q96RD2 323 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 TBX15Q96SF7 602 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 ROPN1BQ9BZX4 212 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-204ENST00000470191 TRIM15Q9C019 465 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 SEMA6AQ9H2E6 1030 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 RASSF4Q9H2L5 321 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 TOR3AQ9H497 397 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 IKZF5Q9H5V7 419 aa7.57□□□□□ -1.2
CCDC171-204ENST00000470191 ROPN1Q9HAT0 212 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-204ENST00000470191 MEPEQ9NQ76 525 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-204ENST00000470191 IGHV1-69DA0A0B4J2H0 117 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 A0A1W2PRD5 423 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 A0A1W2PRF3 423 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 A0A1W2PRM7 423 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 C5orf63A6NC05 138 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 ZNF879B4DU55 563 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 H7C1C5 153 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 P2RY10O00398 339 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 OR7A10O76100 309 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 IGHV1-69P01742 117 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 SCG5P05408 212 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 CD247P20963 164 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 PMELP40967 661 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 IER3P46695 156 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 SRP9P49458 86 aaKnown RBP7.56□□□□□ -1.2
CCDC171-204ENST00000470191 ZNF133P52736 654 aaPredicted RBP7.56□□□□□ -1.2
CCDC171-204ENST00000470191 BPIFB3P59826 476 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 PCBD1P61457 104 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 ARF6P62330 175 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 LCN6P62502 163 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 PRB3Q04118 309 aaPredicted RBP7.56□□□□□ -1.2
CCDC171-204ENST00000470191 OXLD1Q5BKU9 147 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 PAGE3Q5JUK9 113 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 ARMC4Q5T2S8 1044 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 GDPGP1Q6ZNW5 385 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 EIF1ADQ8N9N8 165 aaKnown RBP7.56□□□□□ -1.2
CCDC171-204ENST00000470191 ZSCAN4Q8NAM6 433 aaPredicted RBP7.56□□□□□ -1.2
CCDC171-204ENST00000470191 GPR32P1Q8NGA4 272 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 HAVCR1Q96D42 359 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 MAGEB18Q96M61 343 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 WDFY2Q96P53 400 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 RBP7Q96R05 134 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 SEPHS2Q99611 448 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 WDR76Q9H967 626 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 SDR39U1Q9NRG7 319 aaPredicted RBP7.56□□□□□ -1.2
CCDC171-204ENST00000470191 UFSP2Q9NUQ7 469 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 VAPAQ9P0L0 249 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 DNAJB11Q9UBS4 358 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 NDRG4Q9ULP0 352 aaKnown RBP7.56□□□□□ -1.2
CCDC171-204ENST00000470191 TMCC3Q9ULS5 477 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 SIGLEC9Q9Y336 463 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 FAM96BQ9Y3D0 163 aa7.56□□□□□ -1.2
CCDC171-204ENST00000470191 ELOVL7A1L3X0 281 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 LRRC30A6NM36 301 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 C12orf71A8MTZ7 269 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 EVPLLA8MZ36 301 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 CENPBD1B2RD01 187 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 IFNL4K9M1U5 179 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 M0QX08 132 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 PHYHO14832 338 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 RGS16O15492 202 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-204ENST00000470191 MLNRO43193 412 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 SGCEO43556 437 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 SHOX2O60902 331 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-204ENST00000470191 OPN1MWP04001 364 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 HLA-DPB1P04440 258 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 OPN1MW2P0DN77 364 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 OPN1MW3P0DN78 364 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 IRF2P14316 349 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 MSR1P21757 451 aa7.55□□□□□ -1.2
CCDC171-204ENST00000470191 SMCPP49901 116 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms