RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 CDC20Q12834 499 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 NAB1Q13506 487 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 ZNF77Q15935 545 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 SLC25A52Q3SY17 297 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 ACTBL2Q562R1 376 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 TFDP3Q5H9I0 405 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 DMRTC1Q5HYR2 192 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 LY6G6FQ5SQ64 297 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 TPRG1LQ5T0D9 272 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 MARCH8Q5T0T0 291 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 SDHAF4Q5VUM1 108 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 LPCAT4Q643R3 524 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 SPESP1Q6UW49 350 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 TFAP2EQ6VUC0 442 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 COX15Q7KZN9 410 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 APTXQ7Z2E3 356 aaKnown RBP3.19□□□□□ -1.9
COL11A1-208ENST00000470170 OR2W3Q7Z3T1 314 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 CADM2Q8N3J6 435 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 OR2AP1Q8NGE2 309 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 OR6K2Q8NGY2 324 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 ACER1Q8TDN7 264 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 DTD1Q8TEA8 209 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 DNAJB3Q8WWF6 145 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 UBE2E3Q969T4 207 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 TADA1Q96BN2 335 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 ITCHQ96J02 903 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 PLEKHF1Q96S99 279 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 MICU1Q9BPX6 476 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 NICN1Q9BSH3 213 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 HCAR1Q9BXC0 346 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 RAB34Q9BZG1 259 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 C6orf62Q9GZU0 229 aaPredicted RBP3.19□□□□□ -1.9
COL11A1-208ENST00000470170 DEFB129Q9H1M3 183 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 NIPAL2Q9H841 368 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 SIRT7Q9NRC8 400 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 EXD2Q9NVH0 621 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 C1orf109Q9NX04 203 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 TAS2R9Q9NYW1 312 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 GALPQ9UBC7 116 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 PURGQ9UJV8 347 aaKnown RBP3.19□□□□□ -1.9
COL11A1-208ENST00000470170 ZNF221Q9UK13 617 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 SLC22A13Q9Y226 551 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 PDE10AQ9Y233 779 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 AP3M1Q9Y2T2 418 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 TBL2Q9Y4P3 447 aaKnown RBP3.19□□□□□ -1.9
COL11A1-208ENST00000470170 MAP3K5Q99683 1374 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 MAPK8IP3Q9UPT6 1336 aa3.19□□□□□ -1.9
COL11A1-208ENST00000470170 ATP10AO60312 1499 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 JCADQ9P266 1359 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 SLC22A20A6NK97 555 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 CLDN34H7C241 214 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 RGS16O15492 202 aaPredicted RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 B4GALT5O43286 388 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 TNFAIP8O95379 198 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 BRI3O95415 125 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 CA1P00915 261 aaPredicted RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 RHOCP08134 193 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 CT62P0C5K7 136 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 CALM1P0DP23 149 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 CALM2P0DP24 149 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 CALM3P0DP25 149 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 HSPD1P10809 573 aaKnown RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 PSG2P11465 335 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 BCKDHAP12694 445 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 ATF6P18850 670 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 POLR2EP19388 210 aaKnown RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 CXCR2P25025 360 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 RPL4P36578 427 aaKnown RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 MAP3K8P41279 467 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 RBM34P42696 430 aaKnown RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 MAGEA6P43360 314 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 RANBP1P43487 201 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 GNPDA1P46926 289 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 CAPZBP47756 277 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 TMED10P49755 219 aaKnown RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 EMDP50402 254 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 PKNOX1P55347 436 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 RGS1Q08116 209 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 PDIA2Q13087 525 aaKnown RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 EBI3Q14213 229 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 PDK2Q15119 407 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 ZIC1Q15915 447 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 POU2AF1Q16633 256 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 KCTD19Q17RG1 926 aaPredicted RBP3.18□□□□□ -1.9
COL11A1-208ENST00000470170 TP53I3Q53FA7 332 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 PPM1LQ5SGD2 360 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 IDNKQ5T6J7 187 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 SPOPLQ6IQ16 392 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 CERS6Q6ZMG9 384 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 TAC4Q86UU9 113 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 UNC93AQ86WB7 457 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 ZNF547Q8IVP9 402 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 GID4Q8IVV7 300 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 CDRT4Q8N9R6 151 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 ATP6V1C2Q8NEY4 427 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 OR5B17Q8NGF7 314 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 OR5L2Q8NGL0 311 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 OR5M1Q8NGP8 315 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 OR5AK3PQ8NH89 298 aa3.18□□□□□ -1.9
COL11A1-208ENST00000470170 PLPPR1Q8TBJ4 325 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms