RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TUBG1P23258 451 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 TNFSF4P23510 183 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 FPR2P25090 351 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 COMPP49747 757 aaPredicted RBP11.2□□□□□ -0.62
CPSF4-210ENST00000469897 CCDC92Q53HC0 331 aaPredicted RBP11.2□□□□□ -0.62
CPSF4-210ENST00000469897 C8orf82Q6P1X6 216 aaPredicted RBP11.2□□□□□ -0.62
CPSF4-210ENST00000469897 CYP4Z1Q86W10 505 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 LRRC28Q86X40 367 aaPredicted RBP11.2□□□□□ -0.62
CPSF4-210ENST00000469897 ZDHHC22Q8N966 263 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 ATG16L2Q8NAA4 619 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 NPEPL1Q8NDH3 523 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 RBM4Q9BWF3 364 aaKnown RBP11.2□□□□□ -0.62
CPSF4-210ENST00000469897 NUAK2Q9H093 628 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 SYT4Q9H2B2 425 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 ESM1Q9NQ30 184 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 NRIP3Q9NQ35 241 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 TUBG2Q9NRH3 451 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 ASH2LQ9UBL3 628 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 SIGLEC7Q9Y286 467 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 IER3IP1Q9Y5U9 82 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 ENPP4Q9Y6X5 453 aa11.2□□□□□ -0.62
CPSF4-210ENST00000469897 SOCS2O14508 198 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 RER1O15258 196 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 CCDC22O60826 627 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 H1F0P07305 194 aaKnown RBP11.19□□□□□ -0.62
CPSF4-210ENST00000469897 DBHP09172 617 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 CDKN2AP42771 156 aaKnown RBP11.19□□□□□ -0.62
CPSF4-210ENST00000469897 SLC6A9P48067 706 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 CENPAP49450 140 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 SEC61A1P61619 476 aaKnown RBP11.19□□□□□ -0.62
CPSF4-210ENST00000469897 LSM6P62312 80 aaKnown RBP11.19□□□□□ -0.62
CPSF4-210ENST00000469897 AQP6Q13520 282 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 HLXQ14774 488 aaPredicted RBP11.19□□□□□ -0.62
CPSF4-210ENST00000469897 GLYATQ6IB77 296 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.19□□□□□ -0.62
CPSF4-210ENST00000469897 GLB1L2Q8IW92 636 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 OR5AS1Q8N127 324 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 KLHL36Q8N4N3 616 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 ZNF283Q8N7M2 679 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 FAM156AQ8NDB6 213 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 OR1F12Q8NHA8 337 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 ITLN1Q8WWA0 313 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 DVL3Q92997 716 aaPredicted RBP11.19□□□□□ -0.62
CPSF4-210ENST00000469897 TSSK2Q96PF2 358 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 ANKRD19PQ9H560 264 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 CCDC134Q9H6E4 229 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 PATZ1Q9HBE1 687 aaKnown RBP11.19□□□□□ -0.62
CPSF4-210ENST00000469897 ZNF446Q9NWS9 450 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 PTTG3PQ9NZH4 202 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 NDUFAF4Q9P032 175 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 IL19Q9UHD0 177 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 PPP1R3CQ9UQK1 317 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 TMEM5Q9Y2B1 443 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 FAM32AQ9Y421 112 aaKnown RBP11.19□□□□□ -0.62
CPSF4-210ENST00000469897 PPIAL4AQ9Y536 164 aa11.19□□□□□ -0.62
CPSF4-210ENST00000469897 A0A1W2PRQ8 180 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 DIRAS1O95057 198 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 ZNF205O95201 554 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 FSHBP01225 129 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 EGR1P18146 543 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 SDHAP31040 664 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 OMPP47874 163 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 LIMS1P48059 325 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 PSME3P61289 254 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 DBPQ10586 325 aaPredicted RBP11.18□□□□□ -0.62
CPSF4-210ENST00000469897 KRR1Q13601 381 aaKnown RBP11.18□□□□□ -0.62
CPSF4-210ENST00000469897 DGCR6Q14129 220 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 ZMYND11Q15326 602 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 SEC23BQ15437 767 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 FGD3Q5JSP0 725 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 GPR139Q6DWJ6 353 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 OR2T2Q6IF00 324 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 PTCHD4Q6ZW05 846 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 SPICQ8N5J4 248 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 DEFB108BQ8NET1 73 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 OR52J3Q8NH60 311 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 COG8Q96MW5 612 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 OR2V2Q96R30 315 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 GPA33Q99795 319 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 KCTD14Q9BQ13 255 aaPredicted RBP11.18□□□□□ -0.62
CPSF4-210ENST00000469897 NDEL1Q9GZM8 345 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 NTN4Q9HB63 628 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 SRA1Q9HD15 236 aaKnown RBP11.18□□□□□ -0.62
CPSF4-210ENST00000469897 DDX28Q9NUL7 540 aaKnown RBP11.18□□□□□ -0.62
CPSF4-210ENST00000469897 VSX1Q9NZR4 365 aaPredicted RBP11.18□□□□□ -0.62
CPSF4-210ENST00000469897 RPS6KA6Q9UK32 745 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 AUP1Q9Y679 476 aa11.18□□□□□ -0.62
CPSF4-210ENST00000469897 PPIAL4EA0A075B759 164 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 PPIAL4CA0A0B4J2A2 164 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 TRBV4-1A0A0J9YWV2 114 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 IGHV3-64DA0A0J9YX35 117 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 OR6C6A6NF89 314 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 UNC119BA6NIH7 251 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 PPIAL4DF5H284 164 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 H0YL77 283 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 TMEM178BH3BS89 294 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 DCTN6O00399 190 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 SURF4O15260 269 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 PPIAL4FP0DN26 164 aa11.17□□□□□ -0.62
CPSF4-210ENST00000469897 RAC2P15153 192 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms