RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 SLC7A6Q92536 515 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 CCL17Q92583 94 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 NUAK2Q9H093 628 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 KRCC1Q9NPI7 259 aaPredicted RBP13.8□□□□□ -0.2
COL9A3-208ENST00000469802 PLEK2Q9NYT0 353 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 MAGEL2Q9UJ55 1249 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 PURGQ9UJV8 347 aaKnown RBP13.8□□□□□ -0.2
COL9A3-208ENST00000469802 AURKCQ9UQB9 309 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 IER3IP1Q9Y5U9 82 aa13.8□□□□□ -0.2
COL9A3-208ENST00000469802 J3QW42 95 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 DCTN6O00399 190 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 TIMM8AO60220 97 aaPredicted RBP13.79□□□□□ -0.2
COL9A3-208ENST00000469802 AVPP01185 164 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 CDKN2AP42771 156 aaKnown RBP13.79□□□□□ -0.2
COL9A3-208ENST00000469802 RPS6KA3P51812 740 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 HIST1H3AP68431 136 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 SLC3A1Q07837 685 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 CCDC92Q53HC0 331 aaPredicted RBP13.79□□□□□ -0.2
COL9A3-208ENST00000469802 HIST2H3PS2Q5TEC6 136 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 HIST2H3AQ71DI3 136 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 PGAM4Q8N0Y7 254 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 OR52J3Q8NH60 311 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 OR1F12Q8NHA8 337 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 FANK1Q8TC84 345 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 PYURFQ96I23 114 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 TMPRSS13Q9BYE2 586 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 FAM107BQ9H098 131 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 NSRP1Q9H0G5 558 aaKnown RBP13.79□□□□□ -0.2
COL9A3-208ENST00000469802 DCAF16Q9NXF7 216 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 CD300AQ9UGN4 299 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 STARD10Q9Y365 291 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 LHFPL6Q9Y693 200 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 V9GYQ6 96 aa13.79□□□□□ -0.2
COL9A3-208ENST00000469802 A0A0A6YYJ9 748 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 IGLV1-36A0A0B4J1U3 117 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 A0A0G2JMP0 313 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 A0A0X1KG70 313 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 ARPC3O15145 178 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 RER1O15258 196 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 GMNNO75496 209 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 PPP1R3DO95685 299 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 IGHV2-70P01814 119 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 FPR3P25089 353 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 TNFAIP6P98066 277 aaPredicted RBP13.78□□□□□ -0.2
COL9A3-208ENST00000469802 HNRNPA0Q13151 305 aaKnown RBP13.78□□□□□ -0.2
COL9A3-208ENST00000469802 PGM2L1Q6PCE3 622 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 SHQ1Q6PI26 577 aaKnown RBP13.78□□□□□ -0.2
COL9A3-208ENST00000469802 OR4M2Q8NGB6 313 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 COG8Q96MW5 612 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 TSSK2Q96PF2 358 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 DCLRE1CQ96SD1 692 aaKnown RBP13.78□□□□□ -0.2
COL9A3-208ENST00000469802 GAL3ST1Q99999 423 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 OR52D1Q9H346 318 aa13.78□□□□□ -0.2
COL9A3-208ENST00000469802 LOC105371242A0A075B767 164 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 J3QLI3 93 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 ARPC2O15144 300 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 VENTXO95231 258 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 GADD45GO95257 159 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 GPANK1O95872 356 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 CRABP1P29762 137 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 ERFP50548 548 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 SMIM11AP58511 58 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 SPIBQ01892 262 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 COX10Q12887 443 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 SCGB2A2Q13296 93 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 KRT72Q14CN4 511 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 RFX4Q33E94 735 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 SAMD4BQ5PRF9 694 aaKnown RBP13.77□□□□□ -0.21
COL9A3-208ENST00000469802 FAHD2BQ6P2I3 314 aaPredicted RBP13.77□□□□□ -0.21
COL9A3-208ENST00000469802 DNM1P34Q6PK57 102 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 FBXW12Q6X9E4 464 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 C1QL2Q7Z5L3 287 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 TEX29Q8N6K0 151 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 ZNF283Q8N7M2 679 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 SLC26A10Q8NG04 563 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 ZFAND2BQ8WV99 257 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 HAVCR1Q96D42 359 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 CMBLQ96DG6 245 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 FAHD2AQ96GK7 314 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 SAMD8Q96LT4 415 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 SIGLEC11Q96RL6 698 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 HDHD2Q9H0R4 259 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 RERGLQ9H628 205 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 TMEM106BQ9NUM4 274 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 TENM1Q9UKZ4 2725 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 NPTNQ9Y639 398 aa13.77□□□□□ -0.21
COL9A3-208ENST00000469802 DBHP09172 617 aa13.76□□□□□ -0.21
COL9A3-208ENST00000469802 RAC2P15153 192 aa13.76□□□□□ -0.21
COL9A3-208ENST00000469802 SLC6A6P31641 620 aa13.76□□□□□ -0.21
COL9A3-208ENST00000469802 GSSP48637 474 aa13.76□□□□□ -0.21
COL9A3-208ENST00000469802 RGS6P49758 472 aa13.76□□□□□ -0.21
COL9A3-208ENST00000469802 MEP1BQ16820 701 aa13.76□□□□□ -0.21
COL9A3-208ENST00000469802 KRTAP27-1Q3LI81 207 aa13.76□□□□□ -0.21
COL9A3-208ENST00000469802 OR6V1Q8N148 313 aa13.76□□□□□ -0.21
COL9A3-208ENST00000469802 OR2Z1Q8NG97 314 aa13.76□□□□□ -0.21
COL9A3-208ENST00000469802 NSMCE2Q96MF7 247 aa13.76□□□□□ -0.21
COL9A3-208ENST00000469802 ERMAPQ96PL5 475 aaPredicted RBP13.76□□□□□ -0.21
COL9A3-208ENST00000469802 COQ7Q99807 217 aa13.76□□□□□ -0.21
COL9A3-208ENST00000469802 OCEL1Q9H607 264 aa13.76□□□□□ -0.21
COL9A3-208ENST00000469802 IL1RAPQ9NPH3 570 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms