RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 EMC6Q9BV81 110 aa11.16□□□□□ -0.62
USP11-206ENST00000469080 FBRSQ9HAH7 460 aa11.16□□□□□ -0.62
USP11-206ENST00000469080 KCND3Q9UK17 655 aa11.16□□□□□ -0.62
USP11-206ENST00000469080 CDV3Q9UKY7 258 aaKnown RBP11.16□□□□□ -0.62
USP11-206ENST00000469080 A6NLC8 198 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 METTL12A8MUP2 240 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 XKRYO14609 159 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 SURF4O15260 269 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 CSN2P05814 226 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 SPARCP09486 303 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 SNRPBP14678 240 aaKnown RBP11.15□□□□□ -0.62
USP11-206ENST00000469080 HNF1AP20823 631 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 NDUFA6P56556 154 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 PKIAP61925 76 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 MLLT11Q13015 90 aaPredicted RBP11.15□□□□□ -0.62
USP11-206ENST00000469080 NPSR1Q6W5P4 371 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 LRRC69Q6ZNQ3 347 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 SYT13Q7L8C5 426 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 C17orf47Q8NEP4 570 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 OR5W2Q8NH69 310 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 ACOT12Q8WYK0 555 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 CCDC74AQ96AQ1 378 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 MICU1Q9BPX6 476 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 SOSTQ9BQB4 213 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 OCSTAMPQ9BR26 566 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 SYT4Q9H2B2 425 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 C19orf12Q9NSK7 152 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 CNOT2Q9NZN8 540 aaKnown RBP11.15□□□□□ -0.62
USP11-206ENST00000469080 RASD1Q9Y272 281 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 ASPMQ8IZT6 3477 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 LOC100509620A0A075B734 347 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 hCG_1809904A0A1W2PP81 198 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 A0A1W2PR64 198 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 A0A1W2PRV1 198 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 CTNSO60931 367 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 HLA-DPB1P04440 258 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 NGFRP08138 427 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 SLC6A6P31641 620 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 PITPNBP48739 271 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 QSOX2Q6ZRP7 698 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 PRSS45Q7RTY3 260 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 OR1L3Q8NH93 324 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 C20orf85Q9H1P6 137 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 PRDM13Q9H4Q3 707 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 BCO1Q9HAY6 547 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 GRHPRQ9UBQ7 328 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 IL17BQ9UHF5 180 aa11.15□□□□□ -0.62
USP11-206ENST00000469080 SIRT4Q9Y6E7 314 aaPredicted RBP11.15□□□□□ -0.62
USP11-206ENST00000469080 A0A087WV48 116 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 OR6C76A6NM76 312 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 PHOX2AO14813 284 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 SLC19A2O60779 497 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 CALCRP30988 508 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 RAD52P43351 418 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 LUMP51884 338 aaPredicted RBP11.15□□□□□ -0.63
USP11-206ENST00000469080 INPP5JQ15735 1006 aaPredicted RBP11.15□□□□□ -0.63
USP11-206ENST00000469080 C14orf28Q4W4Y0 310 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 LBHQ53QV2 105 aaPredicted RBP11.15□□□□□ -0.63
USP11-206ENST00000469080 DMRTA1Q5VZB9 504 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 DPY19L4Q7Z388 723 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 GJD3Q8N144 294 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 ZNF676Q8N7Q3 588 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 GHSRQ92847 366 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 TCTN2Q96GX1 697 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 OR14A2Q96R54 314 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 LANCL2Q9NS86 450 aa11.15□□□□□ -0.63
USP11-206ENST00000469080 GAR1Q9NY12 217 aaKnown RBP11.15□□□□□ -0.63
USP11-206ENST00000469080 SERINC4A6NH21 518 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 HSPA12AO43301 675 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 ZGLP1P0C6A0 271 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 LIMS1P48059 325 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 MRPS10P82664 201 aaKnown RBP11.14□□□□□ -0.63
USP11-206ENST00000469080 MEP1BQ16820 701 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 C12orf73Q69YU5 71 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 MEPCEQ7L2J0 689 aaKnown RBP11.14□□□□□ -0.63
USP11-206ENST00000469080 TMEM200AQ86VY9 491 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 FAM26EQ8N5C1 309 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 MAFAQ8NHW3 353 aaPredicted RBP11.14□□□□□ -0.63
USP11-206ENST00000469080 TSEN15Q8WW01 171 aaKnown RBP11.14□□□□□ -0.63
USP11-206ENST00000469080 HIST1H2BAQ96A08 127 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 ASCL3Q9NQ33 180 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 TRIM36Q9NQ86 728 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 UTS2O95399 124 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 RAC2P15153 192 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 S100A7P31151 101 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 DUSP8Q13202 625 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 TMEM255AQ5JRV8 349 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 THOC3Q96J01 351 aaKnown RBP11.14□□□□□ -0.63
USP11-206ENST00000469080 ZNF350Q9GZX5 532 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 PIPOXQ9P0Z9 390 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 KDM4EB2RXH2 506 aaPredicted RBP11.14□□□□□ -0.63
USP11-206ENST00000469080 H0YIG0 161 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 MT-ND5P03915 603 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 GIPP09681 153 aaPredicted RBP11.14□□□□□ -0.63
USP11-206ENST00000469080 NPSP0C0P6 89 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 ABOP16442 354 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 FRKP42685 505 aaPredicted RBP11.14□□□□□ -0.63
USP11-206ENST00000469080 SORDQ00796 357 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 FOXO1Q12778 655 aa11.14□□□□□ -0.63
USP11-206ENST00000469080 RAB40BQ12829 278 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms