RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ZNF878C9JN71 531 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 ZNF670-ZNF695F2Z2N8 137 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 SYNGR3O43761 229 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 FAM20BO75063 409 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 APOL3O95236 402 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 CRYAAP02489 173 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 CELA3BP08861 270 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 CD40P25942 277 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 APLNRP35414 380 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 GDI2P50395 445 aaKnown RBP13.21□□□□□ -0.29
SNIP1-202ENST00000468040 MED21Q13503 144 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 LAIR2Q6ISS4 152 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 TMEM154Q6P9G4 183 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 KCTD18Q6PI47 426 aaPredicted RBP13.21□□□□□ -0.29
SNIP1-202ENST00000468040 OR10H4Q8NGA5 316 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 OR4F15Q8NGB8 312 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 OR1F12Q8NHA8 337 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 THEM6Q8WUY1 208 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 LGALS12Q96DT0 336 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 SLAMF6Q96DU3 332 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 PLPPR2Q96GM1 343 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 MS4A3Q96HJ5 214 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 COQ7Q99807 217 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 PNRC2Q9NPJ4 139 aaKnown RBP13.21□□□□□ -0.29
SNIP1-202ENST00000468040 DDX28Q9NUL7 540 aaKnown RBP13.21□□□□□ -0.29
SNIP1-202ENST00000468040 SCN3BQ9NY72 215 aa13.21□□□□□ -0.29
SNIP1-202ENST00000468040 CNOT2Q9NZN8 540 aaKnown RBP13.21□□□□□ -0.29
SNIP1-202ENST00000468040 EXOGQ9Y2C4 368 aaKnown RBP13.21□□□□□ -0.29
SNIP1-202ENST00000468040 TENM4Q6N022 2769 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 LRRK2Q5S007 2527 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 EFCAB10A6NFE3 127 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 DPRXA6NFQ7 191 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 DEFB108AA8MXU0 73 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 CD3EP07766 207 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 PIPP12273 146 aaPredicted RBP13.2□□□□□ -0.3
SNIP1-202ENST00000468040 APEX1P27695 318 aaKnown RBP13.2□□□□□ -0.3
SNIP1-202ENST00000468040 SLC15A1P46059 708 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 NAAAQ02083 359 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 BSPH1Q075Z2 132 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 NCMAPQ5T1S8 102 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 ACBD7Q8N6N7 88 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 BPIFB6Q8NFQ5 453 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 SMAP2Q8WU79 429 aaPredicted RBP13.2□□□□□ -0.3
SNIP1-202ENST00000468040 RNF133Q8WVZ7 376 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 IPCEF1Q8WWN9 437 aaPredicted RBP13.2□□□□□ -0.3
SNIP1-202ENST00000468040 RADILQ96JH8 1075 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 MYCBPQ99417 103 aaPredicted RBP13.2□□□□□ -0.3
SNIP1-202ENST00000468040 COPS4Q9BT78 406 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 CDH20Q9HBT6 801 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 INPP5EQ9NRR6 644 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 CENPMQ9NSP4 180 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 KLHDC2Q9Y2U9 406 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 LRRC42Q9Y546 428 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 ADGRG4Q8IZF6 3080 aa13.2□□□□□ -0.3
SNIP1-202ENST00000468040 A0A1W2PQL4 384 aaPredicted RBP13.19□□□□□ -0.3
SNIP1-202ENST00000468040 DAPL1A0PJW8 107 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 C5orf49A4QMS7 147 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 A6NNC1 897 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 J3QRE1 110 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 SLC1A7O00341 560 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 CCDC159P0C7I6 412 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 HCCSP53701 268 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 GRB2P62993 217 aaKnown RBP13.19□□□□□ -0.3
SNIP1-202ENST00000468040 ROM1Q03395 351 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 EGR3Q06889 387 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 TAF13Q15543 124 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 DEGS2Q6QHC5 323 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 MYPOPQ86VE0 399 aaPredicted RBP13.19□□□□□ -0.3
SNIP1-202ENST00000468040 OR52I1Q8NGK6 324 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 OR10S1Q8NGN2 331 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 SPTSSAQ969W0 71 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 PIK3IP1Q96FE7 263 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 MRPL48Q96GC5 212 aaKnown RBP13.19□□□□□ -0.3
SNIP1-202ENST00000468040 POM121L2Q96KW2 1035 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 DCLRE1CQ96SD1 692 aaKnown RBP13.19□□□□□ -0.3
SNIP1-202ENST00000468040 AMELYQ99218 206 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 TBX5Q99593 518 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 MROQ9BYG7 248 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 FGF20Q9NP95 211 aaPredicted RBP13.19□□□□□ -0.3
SNIP1-202ENST00000468040 PSORS1C1Q9UIG5 152 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 BLOC1S6Q9UL45 172 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 COPS3Q9UNS2 423 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 TPRKBQ9Y3C4 175 aa13.19□□□□□ -0.3
SNIP1-202ENST00000468040 ANKHD1Q8IWZ3 2542 aaKnown RBP13.19□□□□□ -0.3
SNIP1-202ENST00000468040 LOC100509620A0A075B734 347 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 ABCD4O14678 606 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 SIAH2O43255 324 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 XPNPEP2O43895 674 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 ZNF254O75437 659 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 IGHA1P01876 353 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 H2BFMP0C1H6 154 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 ZNF35P13682 527 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 MYL12AP19105 171 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 CCNOP22674 350 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 DCKP27707 260 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 OPRL1P41146 370 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 GALK2Q01415 458 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 RBM48Q5RL73 367 aaKnown RBP13.18□□□□□ -0.3
SNIP1-202ENST00000468040 ARL9Q6T311 187 aa13.18□□□□□ -0.3
SNIP1-202ENST00000468040 ZNF322Q6U7Q0 402 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms