RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 NAT6Q93015 286 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 GAL3ST4Q96RP7 486 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 SLC25A21Q9BQT8 299 aaPredicted RBP13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 VN1R1Q9GZP7 353 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 SCPEP1Q9HB40 452 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 UPB1Q9UBR1 384 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 SEC16AO15027 2179 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 TMEM82A0PJX8 343 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 LGALS8O00214 317 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 LDLRAD4O15165 306 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 DXOO77932 396 aaKnown RBP13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 RAB3DO95716 219 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 HPP00738 406 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 CFIP05156 583 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 ZNF735P0CB33 412 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 CTLA4P16410 223 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 HTR2CP28335 458 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 CENPAP49450 140 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 CCL7P80098 99 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 ETFDHQ16134 617 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 GLYATL3Q5SZD4 288 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 RHBDD2Q6NTF9 364 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 C11orf88Q6PI97 169 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 POMZP3Q6PJE2 187 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 RABEPKQ7Z6M1 372 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 MARCH3Q86UD3 253 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 GALNT16Q8N428 558 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 ST8SIA4Q92187 359 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 EDEM2Q9BV94 578 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 POTEKPQ9BYX7 375 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 TXNIPQ9H3M7 391 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 TAS2R4Q9NYW5 299 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 COPS7AQ9UBW8 275 aa13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 MRPS18BQ9Y676 258 aaKnown RBP13.2□□□□□ -0.3
PRPF38B-204ENST00000467302 TSPAN4O14817 238 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 SRSF10O75494 262 aaKnown RBP13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 PLGP00747 810 aaPredicted RBP13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 CD8AP01732 235 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 RLN2P04090 185 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 CD74P04233 296 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 SPARCP09486 303 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 NAGAP17050 411 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 ATF4P18848 351 aaPredicted RBP13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 KCTD18Q6PI47 426 aaPredicted RBP13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 TMEM205Q6UW68 189 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 C1orf210Q8IVY1 113 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 MAML2Q8IZL2 1156 aaPredicted RBP13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 STPG2Q8N412 459 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 C12orf45Q8N5I9 185 aaPredicted RBP13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 PLPP5Q8NEB5 264 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 ABHD6Q9BV23 337 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 TINAGL1Q9GZM7 467 aaPredicted RBP13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 SLCO5A1Q9H2Y9 848 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 GAREM1Q9H706 876 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 CKLFQ9UBR5 152 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 GLS2Q9UI32 602 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 ZNF107Q9UII5 783 aaPredicted RBP13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 GTF2A1LQ9UNN4 478 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 PRELID1Q9Y255 219 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 FER1L5A0AVI2 2057 aa13.19□□□□□ -0.3
PRPF38B-204ENST00000467302 A0A1B0GTI1 187 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 A0A1W2PQD3 144 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 A0A1W2PQM1 296 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 ALG1L2C9J202 215 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 EIF4E2O60573 245 aaKnown RBP13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 IGHMP01871 453 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 CTRB1P17538 263 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 RIDAP52758 137 aaKnown RBP13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 ADAM8P78325 824 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 SRSF4Q08170 494 aaKnown RBP13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 EBPQ15125 230 aaKnown RBP13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 CLVS2Q5SYC1 327 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 CTRB2Q6GPI1 263 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 MDGA2Q7Z553 956 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 C9orf40Q8IXQ3 194 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 ZNF454Q8N9F8 522 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 OR1N1Q8NGS0 311 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 SLC25A36Q96CQ1 311 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 OR6C1Q96RD1 312 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 TGIF2Q9GZN2 237 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 MS4A7Q9GZW8 240 aaPredicted RBP13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 CTSFQ9UBX1 484 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 GPR160Q9UJ42 338 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 LRP12Q9Y561 859 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 A0A0A6YYH2 397 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 A6NJ64 397 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 D6RAR5 112 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 M0QYG6 137 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 TSPAN2O60636 221 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 OR6A2O95222 327 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 SPDEFO95238 335 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 CD2P06729 351 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 MGMTP16455 207 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 IL12BP29460 328 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 NR0B1P51843 470 aaKnown RBP13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 ATPAF1Q5TC12 328 aaPredicted RBP13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 COX15Q7KZN9 410 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 ZNF627Q7L945 461 aa13.18□□□□□ -0.3
PRPF38B-204ENST00000467302 SLC29A4Q7RTT9 530 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms