RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 MYOZ2Q9NPC6 264 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 DDX18Q9NVP1 670 aaKnown RBP2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 PDP1Q9P0J1 537 aaPredicted RBP2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 CTSFQ9UBX1 484 aa2.75□□□□□ -1.97
CDC42BPA-211ENST00000466538 CAMTA1Q9Y6Y1 1673 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 IGLV1-36A0A0B4J1U3 117 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 IGHV5-10-1A0A0J9YXX1 117 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 A0A1B0GTQ1 180 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 A0A1B0GVX0 72 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 A0A1W2PRD5 423 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 OR6C74A6NCV1 312 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 RAD51CO43502 376 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 MED6O75586 246 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 RP2O75695 350 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 FLOT1O75955 427 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 HBE1P02100 147 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 RALBP11234 206 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 PGAM1P18669 254 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 GGT1P19440 569 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 TCN2P20062 427 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 MAGP20916 626 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 CEACAM3P40198 252 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 PPOXP50336 477 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 P2RX1P51575 399 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 UBE2NP61088 152 aaKnown RBP2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 CDH17Q12864 832 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 IRF4Q15306 451 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 RGNQ15493 299 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 ORMDL2Q53FV1 153 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 TPTE2P1Q5T6R2 138 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 GPR107Q5VW38 600 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 METTL21CQ5VZV1 264 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 MBOAT2Q6ZWT7 520 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 PGAM4Q8N0Y7 254 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 OR52E2Q8NGJ4 325 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 OR6Q1Q8NGQ2 317 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 TM4SF18Q96CE8 201 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 C9orf72Q96LT7 481 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 TMEM38AQ9H6F2 299 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 RETNQ9HD89 108 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 HMG20AQ9NP66 347 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 CLN6Q9NWW5 311 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 TRMT112Q9UI30 125 aaKnown RBP2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 FHOD3Q2V2M9 1422 aa2.74□□□□□ -1.97
CDC42BPA-211ENST00000466538 A0A1W2PP18 115 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 TSPAN11A1L157 253 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 SUPT3HB4E1H0 165 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 ANKRD63C9JTQ0 380 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 CDC40O60508 579 aaKnown RBP eCLIP2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 FCN3O75636 299 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 IGHV1-8P0DP01 117 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 U2AF2P26368 475 aaKnown RBP eCLIP2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 CCT6AP40227 531 aaKnown RBP2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 RPS5P46782 204 aaKnown RBP2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 ZNF121P58317 390 aaPredicted RBP2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 KRTAP12-2P59991 146 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 RAP1AP62834 184 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 LRRC63Q05C16 580 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 ILKQ13418 452 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 KIR2DS1Q14954 304 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 KLHL40Q2TBA0 621 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 PLCXD3Q63HM9 321 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 OR52W1Q6IF63 320 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 DNAJC24Q6P3W2 148 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 Q6ZVH6 145 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 MRPL55Q7Z7F7 128 aaKnown RBP2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 CBR4Q8N4T8 237 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 OR5W2Q8NH69 310 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 FOXC2Q99958 501 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 PLA2G2FQ9BZM2 168 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 PIGUQ9H490 435 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 CRLF2Q9HC73 371 aa2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 DDX19AQ9NUU7 478 aaKnown RBP2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 PEF1Q9UBV8 284 aaKnown RBP2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 RCL1Q9Y2P8 373 aaKnown RBP2.73□□□□□ -1.97
CDC42BPA-211ENST00000466538 MROH7-TTC4A0A0A0MT08 1334 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 GOLGA6L7A0A1B0GV03 622 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 A0A1B0GW55 424 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 L7N2F9 121 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 MAGEB4O15481 346 aaPredicted RBP2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 ENTPD5O75356 428 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 HPRT1P00492 218 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 CTSLP07711 333 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 CD3GP09693 182 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 UBCP0CG48 685 aaKnown RBP2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 DUX4L2P0CJ85 424 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 DUX4L3P0CJ86 424 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 DUX4L5P0CJ88 424 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 DUX4L6P0CJ89 424 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 DUX4L7P0CJ90 424 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 ERGP11308 486 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 IGFBP3P17936 291 aaPredicted RBP2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 PSMC3P17980 439 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 HCAR3P49019 387 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 CLDN8P56748 225 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 ESRRGP62508 458 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 PIP5KL1Q5T9C9 394 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 PLET1Q6UQ28 207 aa2.72□□□□□ -1.97
CDC42BPA-211ENST00000466538 ADAMTS13Q76LX8 1427 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms