RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 SLC19A2O60779 497 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 ACTL6AO96019 429 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 ITGB2P05107 769 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 STEAP3Q658P3 488 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 FAM131AQ6UXB0 335 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 AAED1Q7RTV5 226 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 PPP1R14AQ96A00 147 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 CNTNAP3BQ96NU0 1288 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 CNTNAP3Q9BZ76 1288 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 G6PC2Q9NQR9 355 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 PAQR5Q9NXK6 330 aaPredicted RBP18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 OR52A1Q9UKL2 312 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 SLC2A2P11168 524 aaPredicted RBP18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 ZNF84P51523 738 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 SGCAQ16586 387 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 CNIH2Q6PI25 160 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 DCDC5Q6ZRR9 648 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 TSEN15Q8WW01 171 aaKnown RBP18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 NABP1Q96AH0 204 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 ZNF416Q9BWM5 594 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 RBM24Q9BX46 236 aaKnown RBP18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 SRRQ9GZT4 340 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 SLITRK2Q9H156 845 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 TCF7L1Q9HCS4 588 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 KCNMB2Q9Y691 235 aa18.67■□□□□ 0.58
PPP1R3F-203ENST00000466508 IGKV3D-15A0A087WSY6 115 aa18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 ANKRD61A6NGH8 418 aa18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 CEACAM4O75871 244 aa18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 ISG15P05161 165 aa18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 ATF1P18846 271 aa18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 APEX1P27695 318 aaKnown RBP18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 EVX1P49640 407 aa18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 RNFT1Q5M7Z0 435 aa18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 KLHL24Q6TFL4 600 aa18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 STAC2Q6ZMT1 411 aa18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 Q6ZNX1 250 aa18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 CENPSQ8N2Z9 138 aa18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 ZDHHC11Q9H8X9 412 aa18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 FAM206AQ9NX38 181 aa18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 LIPGQ9Y5X9 500 aa18.66■□□□□ 0.58
PPP1R3F-203ENST00000466508 RER1O15258 196 aa18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 XKRXQ6PP77 449 aa18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 METAP1DQ6UB28 335 aaPredicted RBP18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 TRMT10AQ8TBZ6 339 aaKnown RBP18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 TMEM45BQ96B21 275 aa18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 GFI1Q99684 422 aa18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 NIPAL2Q9H841 368 aa18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 PNRC2Q9NPJ4 139 aaKnown RBP18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 MCTS1Q9ULC4 181 aaKnown RBP18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 PRRC2CQ9Y520 2896 aaKnown RBP18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 H3BSH0 61 aa18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 SYNGR4O95473 234 aa18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 ENDOGQ14249 297 aaKnown RBP18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 BCL2L15Q5TBC7 163 aa18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 ZNF704Q6ZNC4 412 aaPredicted RBP18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 LRRC28Q86X40 367 aaPredicted RBP18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 SOSTQ9BQB4 213 aa18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 ABRACLQ9P1F3 81 aa18.65■□□□□ 0.58
PPP1R3F-203ENST00000466508 EFSO43281 561 aa18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 TMEM127O75204 238 aa18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 PAHP00439 452 aa18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 UBCP0CG48 685 aaKnown RBP18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 ELK1P19419 428 aa18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 AZGP1P25311 298 aaKnown RBP18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 PSMA6P60900 246 aaKnown RBP18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 MRPS34P82930 218 aaKnown RBP18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 OXA1LQ15070 435 aa18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 RIPPLY2Q5TAB7 128 aa18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 GPR137CQ8N3F9 429 aa18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 ZNF433Q8N7K0 673 aaPredicted RBP18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 SAMD12Q8N8I0 201 aa18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 ZNF837Q96EG3 531 aaPredicted RBP18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 DEFB127Q9H1M4 99 aa18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 LDAHQ9H6V9 325 aa18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 CRLF2Q9HC73 371 aa18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 HHLA2Q9UM44 414 aa18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 DHDHQ9UQ10 334 aa18.64■□□□□ 0.57
PPP1R3F-203ENST00000466508 TRAV8-7A0A075B6U6 113 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 TRGV5A0A0B4J1U4 118 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 IFITM5A6NNB3 132 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 AIPO00170 330 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 ACHEP22303 614 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 HSD11B1P28845 292 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 TRIM16LQ309B1 348 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 TMEM244Q5VVB8 128 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 UNQ6494/PRO21346Q6UXR6 183 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 LRRTM1Q86UE6 522 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 GDPD1Q8N9F7 314 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 ASB5Q8WWX0 329 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 ALKBH3Q96Q83 286 aaPredicted RBP18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 MOB1AQ9H8S9 216 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 C14orf119Q9NWQ9 140 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 V9GY05 133 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 TRAV17A0A0B4J275 112 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 LOC107986453A0A1B0GWG9 222 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 ADRA2CP18825 462 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 PTBP1P26599 531 aaKnown RBP eCLIP18.63■□□□□ 0.576e-8■■■□□ 17.8
PPP1R3F-203ENST00000466508 TAF13Q15543 124 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 OR8H2Q8N162 312 aa18.63■□□□□ 0.57
PPP1R3F-203ENST00000466508 MINDY2Q8NBR6 621 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms