RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 FBXL2Q9UKC9 423 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 SIT1Q9Y3P8 196 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 A0A1W2PNR3 127 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 ZFAND5O76080 213 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 AQP8O94778 261 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 ISG15P05161 165 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 AKAIN1P0CW23 69 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 PNLIPP16233 465 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 UBE2MP61081 183 aaKnown RBP7.98□□□□□ -1.13
SYNE1-217ENST00000466159 C2orf68Q2NKX9 166 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 MOGAT2Q3SYC2 334 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 LYSMD4Q5XG99 296 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 CLEC1AQ8NC01 280 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 OR5L2Q8NGL0 311 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 GPX8Q8TED1 209 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 SAP25Q8TEE9 199 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 RNF133Q8WVZ7 376 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 SEH1LQ96EE3 360 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 DUSP23Q9BVJ7 150 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 POTEKPQ9BYX7 375 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 SLC17A5Q9NRA2 495 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 ALKBH4Q9NXW9 302 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 B3GALT5Q9Y2C3 310 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 RPH3AQ9Y2J0 694 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-217ENST00000466159 WIF1Q9Y5W5 379 aa7.98□□□□□ -1.13
SYNE1-217ENST00000466159 NPIPB13A6NJU9 1138 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 SNRPGP15A8MWD9 76 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 LEUTXA8MZ59 168 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 NPIPB4C9JG80 1138 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 SIX6O95475 246 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 CFDP00746 253 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-217ENST00000466159 CD37P11049 281 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 NAGAP17050 411 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 ACHEP22303 614 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 DLX5P56178 289 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 OC90Q02509 493 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-217ENST00000466159 SNTA1Q13424 505 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 EXOSC2Q13868 293 aaKnown RBP7.97□□□□□ -1.13
SYNE1-217ENST00000466159 STEAP1BQ6NZ63 245 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 ZNF704Q6ZNC4 412 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-217ENST00000466159 GPAT4Q86UL3 456 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 PPP1R3BQ86XI6 285 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 UXS1Q8NBZ7 420 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 OR4D6Q8NGJ1 314 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 OR6M1Q8NGM8 313 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 OR10S1Q8NGN2 331 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 FGGYQ96C11 551 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 SLAMF6Q96DU3 332 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 MRGPRX4Q96LA9 322 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 CHST6Q9GZX3 395 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 ARPC4-TTLL3A0A0A6YYG9 625 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 ZNF814B7Z6K7 855 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 ETV2O00321 342 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-217ENST00000466159 TTRP02766 147 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 ACSM4P0C7M7 580 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 ENPP1P22413 925 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 MMP16P51512 607 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 MFAP5Q13361 173 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 POU4F3Q15319 338 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 GRK1Q15835 563 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 HLA-BQ31612 363 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 TMEM244Q5VVB8 128 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 GABRG1Q8N1C3 465 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 OR10H5Q8NGA6 315 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 OR6N1Q8NGY5 312 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 RBP7Q96R05 134 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 MRPL13Q9BYD1 178 aaKnown RBP7.97□□□□□ -1.13
SYNE1-217ENST00000466159 CLEC4MQ9H2X3 399 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-217ENST00000466159 SDHAF3Q9NRP4 125 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 FAM206AQ9NX38 181 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 CYB5R1Q9UHQ9 305 aa7.97□□□□□ -1.13
SYNE1-217ENST00000466159 A0A1W2PNV4 684 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 A0A1W2PPL8 197 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 OR2M5A3KFT3 312 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 MEGF11A6BM72 1044 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 M0QYG6 137 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 MEN1O00255 615 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 LDLRAD4O15165 306 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 RAMP1O60894 148 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 OR2A4O95047 310 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 HRGP04196 525 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 GIPP09681 153 aaPredicted RBP7.96□□□□□ -1.14
SYNE1-217ENST00000466159 GABRA1P14867 456 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 CXCL2P19875 107 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 KLK2P20151 261 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 CDAP32320 146 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 H2BFSP57053 126 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 SLC25A53Q5H9E4 307 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 PHF19Q5T6S3 580 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 CARD17Q5XLA6 110 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 DEGS2Q6QHC5 323 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 ADGRE4PQ86SQ3 457 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 LYPD6Q86Y78 171 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 MUC20Q8N307 709 aaPredicted RBP7.96□□□□□ -1.14
SYNE1-217ENST00000466159 FAM109AQ8N4B1 249 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 OR2I1PQ8NGU4 316 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 NKD1Q969G9 470 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 RADILQ96JH8 1075 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 OR5B2Q96R09 309 aa7.96□□□□□ -1.14
SYNE1-217ENST00000466159 OR2A7Q96R45 310 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 206.1 ms