RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 LIPGQ9Y5X9 500 aa4.83□□□□□ -1.64
VPS41-211ENST00000466017 ZNF407Q9C0G0 2248 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 MED12Q93074 2177 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 GTF3C1Q12789 2109 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 KIAA1549Q9HCM3 1950 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 DMXL1Q9Y485 3027 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 PTPRQQ9UMZ3 2332 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 A0A1B0GTH9 108 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 DPPA5A6NC42 116 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 MBD3L4A6NDZ8 208 aaPredicted RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 MBD3L3A6NE82 208 aaPredicted RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 TRIM64BA6NI03 449 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 MBD3L5A6NJ08 208 aaPredicted RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 C12orf71A8MTZ7 269 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 ZNF670-ZNF695F2Z2N8 137 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 M0R129 80 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 OGG1O15527 345 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 SS18L1O75177 396 aaPredicted RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 MRPL33O75394 65 aaKnown RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 ZNF254O75437 659 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 PLGP00747 810 aaPredicted RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 TFP02787 698 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 QDPRP09417 244 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 CLUP10909 449 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 ATP6V1B1P15313 513 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 CTLA4P16410 223 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 KLK2P20151 261 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 TCEA1P23193 301 aaKnown RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 PAX7P23759 505 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 CTSSP25774 331 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 CSNK1A1P48729 337 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 ENTPD1P49961 510 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 TMBIM6P55061 237 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 MLLT10P55197 1068 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 WNT4P56705 351 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 SCAND1P57086 179 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 CLRN1P58418 232 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 RPS7P62081 194 aaKnown RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 HIST1H3AP68431 136 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 MRPS34P82930 218 aaKnown RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 PMP22Q01453 160 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 ZNF85Q03923 595 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 TPBGQ13641 420 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 MELKQ14680 651 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 NADK2Q4G0N4 442 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 CDONQ4KMG0 1287 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 CCDC58Q4VC31 144 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 HIST2H3PS2Q5TEC6 136 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 FAM27BQ5VT28 67 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 FAM180AQ6UWF9 173 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 TMPRSS11AQ6ZMR5 421 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 PLEKHG7Q6ZR37 379 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 HIST2H3AQ71DI3 136 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 AAED1Q7RTV5 226 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 GPR141Q7Z602 305 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 DPPA2Q7Z7J5 298 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 GPAT4Q86UL3 456 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 CDC20BQ86Y33 519 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 ANKRD13BQ86YJ7 626 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 GLB1L2Q8IW92 636 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 SLC35F2Q8IXU6 374 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 UBQLNLQ8IYU4 475 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 TEX19Q8NA77 164 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 SLC26A10Q8NG04 563 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 OR4F15Q8NGB8 312 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 OR51G2Q8NGK0 314 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 OR9Q1Q8NGQ5 310 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 OTOSQ8NHW6 89 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 MBD3L2Q8NHZ7 208 aaPredicted RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 ZNF420Q8TAQ5 688 aaPredicted RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 FAM57AQ8TBR7 257 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 RPS4Y2Q8TD47 263 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 ASB17Q8WXJ9 295 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 SGCDQ92629 289 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 ITFG2Q969R8 447 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 YIPF6Q96EC8 236 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 ZNF845Q96IR2 970 aaPredicted RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 INTS14Q96SY0 518 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 CNN2Q99439 309 aaKnown RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 MGLLQ99685 303 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 DOK1Q99704 481 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 COQ7Q99807 217 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 EMC6Q9BV81 110 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 PRRG4Q9BZD6 226 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 CCDC90BQ9GZT6 254 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 MED20Q9H944 212 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 SIAEQ9HAT2 523 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 B3GAT2Q9NPZ5 323 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 PLSCR4Q9NRQ2 329 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 MRPL22Q9NWU5 206 aaKnown RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 BABAM2Q9NXR7 383 aa4.82□□□□□ -1.64
VPS41-211ENST00000466017 NOSIPQ9Y314 301 aaKnown RBP4.82□□□□□ -1.64
VPS41-211ENST00000466017 IGKV1D-43A0A0B4J1Z2 117 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 DAPL1A0PJW8 107 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 ACOD1A6NK06 481 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 SLC22A20A6NK97 555 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 ZNF593O00488 134 aaPredicted RBP4.81□□□□□ -1.64
VPS41-211ENST00000466017 HOXA3O43365 443 aaPredicted RBP4.81□□□□□ -1.64
VPS41-211ENST00000466017 PLPP2O43688 288 aa4.81□□□□□ -1.64
VPS41-211ENST00000466017 INMTO95050 263 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms