RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TMEM33P57088 247 aa18.52■□□□□ 0.56
LIME1-203ENST00000465591 TSPAN31Q12999 210 aa18.52■□□□□ 0.56
LIME1-203ENST00000465591 LCN8Q6JVE9 175 aa18.52■□□□□ 0.56
LIME1-203ENST00000465591 USP51Q70EK9 711 aa18.52■□□□□ 0.56
LIME1-203ENST00000465591 LINC01356Q8N9X3 169 aa18.52■□□□□ 0.56
LIME1-203ENST00000465591 GNPDA2Q8TDQ7 276 aa18.52■□□□□ 0.56
LIME1-203ENST00000465591 FN3KQ9H479 309 aa18.52■□□□□ 0.56
LIME1-203ENST00000465591 EGLN3Q9H6Z9 239 aa18.52■□□□□ 0.56
LIME1-203ENST00000465591 SRA1Q9HD15 236 aaKnown RBP18.52■□□□□ 0.56
LIME1-203ENST00000465591 LPAR3Q9UBY5 353 aa18.52■□□□□ 0.56
LIME1-203ENST00000465591 KLHL21Q9UJP4 597 aa18.52■□□□□ 0.56
LIME1-203ENST00000465591 LHFPL6Q9Y693 200 aa18.52■□□□□ 0.56
LIME1-203ENST00000465591 FAM157AC9JC47 383 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 TNFRSF11BO00300 401 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 CRYBB2P43320 205 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 CENPAP49450 140 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 PSG7Q13046 419 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 MOGQ16653 247 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 CR1LQ2VPA4 569 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 AVPI1Q5T686 147 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 ZNF770Q6IQ21 691 aaPredicted RBP18.51■□□□□ 0.55
LIME1-203ENST00000465591 CORO6Q6QEF8 472 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 UNQ6126/PRO20091Q6UXV3 157 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 OR1F12Q8NHA8 337 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 CLPTM1LQ96KA5 538 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 PLA2G12AQ9BZM1 189 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 MSL2Q9HCI7 577 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 TBCCD1Q9NVR7 557 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 TREM2Q9NZC2 230 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 STARD10Q9Y365 291 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 GRIP1Q9Y3R0 1128 aa18.51■□□□□ 0.55
LIME1-203ENST00000465591 WNK2Q9Y3S1 2297 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 IGHV1-69-2A0A0G2JMI3 117 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 OR6C68A6NDL8 312 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 H3BSA7 217 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 KRT36O76013 467 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 TFP02787 698 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 CRABP1P29762 137 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 RBMXP38159 391 aaKnown RBP18.5■□□□□ 0.55
LIME1-203ENST00000465591 IFNGR2P38484 337 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 ERFP50548 548 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 ARHGDIAP52565 204 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 LMO4P61968 165 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 HIST1H3AP68431 136 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 TRIM25Q14258 630 aaKnown RBP18.5■□□□□ 0.55
LIME1-203ENST00000465591 CLEC12AQ5QGZ9 265 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 SLC35F1Q5T1Q4 408 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 HIST2H3PS2Q5TEC6 136 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 HIST2H3AQ71DI3 136 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 JAZF1Q86VZ6 243 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 C1orf174Q8IYL3 243 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 ARHGAP24Q8N264 748 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 SDR9C7Q8NEX9 313 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 SLC26A10Q8NG04 563 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 OR8D4Q8NGM9 314 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 SAP30LQ9HAJ7 183 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 RPRD1BQ9NQG5 326 aaKnown RBP18.5■□□□□ 0.55
LIME1-203ENST00000465591 DECR2Q9NUI1 292 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 DYSFO75923 2080 aa18.5■□□□□ 0.55
LIME1-203ENST00000465591 TPD52L2O43399 206 aaKnown RBP18.49■□□□□ 0.55
LIME1-203ENST00000465591 GASTP01350 101 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 IFNA2P01563 188 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 MT-ND5P03915 603 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 MVKQ03426 396 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 MTX3Q5HYI7 312 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 FAM209AQ5JX71 171 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 DNM1P34Q6PK57 102 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 ARL9Q6T311 187 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 CXXC5Q7LFL8 322 aaKnown RBP18.49■□□□□ 0.55
LIME1-203ENST00000465591 ZBTB46Q86UZ6 589 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 DHFR2Q86XF0 187 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 NPEPL1Q8NDH3 523 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 OR52E2Q8NGJ4 325 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 TRIM15Q9C019 465 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 TAS2R1Q9NYW7 299 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 POLR1DQ9Y2S0 133 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 CDH10Q9Y6N8 788 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 ARHGAP32A7KAX9 2087 aa18.49■□□□□ 0.55
LIME1-203ENST00000465591 PLSCR5A0PG75 271 aa18.48■□□□□ 0.55
LIME1-203ENST00000465591 BHLHE40O14503 412 aa18.48■□□□□ 0.55
LIME1-203ENST00000465591 RENP00797 406 aa18.48■□□□□ 0.55
LIME1-203ENST00000465591 ADH4P08319 380 aa18.48■□□□□ 0.55
LIME1-203ENST00000465591 RSPO1Q2MKA7 263 aaPredicted RBP18.48■□□□□ 0.55
LIME1-203ENST00000465591 Q6ZR03 302 aa18.48■□□□□ 0.55
LIME1-203ENST00000465591 LINC00346Q8IVM7 164 aa18.48■□□□□ 0.55
LIME1-203ENST00000465591 DDOQ99489 341 aa18.48■□□□□ 0.55
LIME1-203ENST00000465591 MUC13Q9H3R2 512 aa18.48■□□□□ 0.55
LIME1-203ENST00000465591 MAGIXQ9H6Y5 334 aa18.48■□□□□ 0.55
LIME1-203ENST00000465591 LPAR2Q9HBW0 351 aa18.48■□□□□ 0.55
LIME1-203ENST00000465591 PURGQ9UJV8 347 aaKnown RBP18.48■□□□□ 0.55
LIME1-203ENST00000465591 IDH3BO43837 385 aa18.47■□□□□ 0.55
LIME1-203ENST00000465591 TIMM8AO60220 97 aaPredicted RBP18.47■□□□□ 0.55
LIME1-203ENST00000465591 UBOX5O94941 541 aa18.47■□□□□ 0.55
LIME1-203ENST00000465591 SRD5A1P18405 259 aa18.47■□□□□ 0.55
LIME1-203ENST00000465591 NOS3P29474 1203 aa18.47■□□□□ 0.55
LIME1-203ENST00000465591 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.47■□□□□ 0.55
LIME1-203ENST00000465591 COX10Q12887 443 aa18.47■□□□□ 0.55
LIME1-203ENST00000465591 ZNF362Q5T0B9 420 aaPredicted RBP18.47■□□□□ 0.55
LIME1-203ENST00000465591 CFAP77Q6ZQR2 320 aa18.47■□□□□ 0.55
LIME1-203ENST00000465591 CYB561A3Q8NBI2 242 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms