RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ERVK-8P63133 956 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 NAAAQ02083 359 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 BDH1Q02338 343 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 CAV1Q03135 178 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 OPCMLQ14982 345 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 TGFBIQ15582 683 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 UAP1Q16222 522 aaPredicted RBP3.51□□□□□ -1.85
UBR4-209ENST00000465036 ADNP2Q6IQ32 1131 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 RNASEKQ6P5S7 137 aaKnown RBP3.51□□□□□ -1.85
UBR4-209ENST00000465036 ERICH5Q6P6B1 374 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 KCNIP4Q6PIL6 250 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 TMEM64Q6YI46 380 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 C17orf107Q6ZR85 190 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 CYS1Q717R9 158 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 C5orf24Q7Z6I8 188 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 THOC6Q86W42 341 aaKnown RBP3.51□□□□□ -1.85
UBR4-209ENST00000465036 C17orf64Q86WR6 236 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 CSNK1A1LQ8N752 337 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 KLHDC1Q8N7A1 406 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 LINC00469Q8N7U9 141 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 LRTM2Q8N967 370 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 TTC29Q8NA56 475 aaPredicted RBP3.51□□□□□ -1.85
UBR4-209ENST00000465036 CCDC197Q8NCU1 140 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 FDCSPQ8NFU4 85 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 OR5T3Q8NGG3 340 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 OR9A4Q8NGU2 314 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 M1APQ8TC57 530 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 MITD1Q8WV92 249 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 KCTD4Q8WVF5 259 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 APOBEC4Q8WW27 367 aaKnown RBP3.51□□□□□ -1.85
UBR4-209ENST00000465036 CDKL2Q92772 493 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 NEIL2Q969S2 332 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 SGK3Q96BR1 496 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 C8orf44Q96CB5 159 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 SLC25A36Q96CQ1 311 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 TM4SF19Q96DZ7 209 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 SH3YL1Q96HL8 342 aaPredicted RBP3.51□□□□□ -1.85
UBR4-209ENST00000465036 AKR1E2Q96JD6 320 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 CENPKQ9BS16 269 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 URM1Q9BTM9 101 aaKnown RBP3.51□□□□□ -1.85
UBR4-209ENST00000465036 NUDT9Q9BW91 350 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 ERVK-6Q9BXR3 956 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 ING2Q9H160 280 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 ALG9Q9H6U8 611 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 ZNF665Q9H7R5 613 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 MCCC2Q9HCC0 563 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 TUBG2Q9NRH3 451 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 UFSP2Q9NUQ7 469 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 ZNF639Q9UID6 485 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 SLC22A14Q9Y267 594 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 HEATR5BQ9P2D3 2071 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 COL6A6A6NMZ7 2263 aa3.51□□□□□ -1.85
UBR4-209ENST00000465036 PRRC2AP48634 2157 aaKnown RBP3.51□□□□□ -1.85
UBR4-209ENST00000465036 TNRC6AQ8NDV7 1962 aaKnown RBP3.51□□□□□ -1.85
UBR4-209ENST00000465036 PCM1Q15154 2024 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 NBASA2RRP1 2371 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 IGLV3-12A0A075B6K2 115 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 IGHV3-20A0A0C4DH32 117 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 A0A0G2JN53 185 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 SH3PXD2BA1X283 911 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 VSTM2BA6NLU5 285 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 WASHC1A8K0Z3 465 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 C9JVG2 144 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 H3BTX0 84 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 NBR2O15453 112 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 SRPX2O60687 465 aaPredicted RBP3.5□□□□□ -1.85
UBR4-209ENST00000465036 RDH16O75452 317 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 CLPXO76031 633 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 TGM6O95932 706 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 SERPIND1P05546 499 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 C2P06681 752 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 LYNP07948 512 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 ANXA5P08758 320 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 STAG3L2P0CL84 134 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 GCAP28676 217 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 LAP3P28838 519 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 SPRP35270 261 aaPredicted RBP3.5□□□□□ -1.85
UBR4-209ENST00000465036 BCAP31P51572 246 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 CCR4P51679 360 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 AP1S2P56377 157 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 RAB8AP61006 207 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 RAB10P61026 200 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 BNIP1Q12981 228 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 GPR50Q13585 617 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 P2RY6Q15077 328 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 OR1C1Q15619 314 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 IGFBP7Q16270 282 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 FAM83EQ2M2I3 478 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 PRR30Q53SZ7 412 aaPredicted RBP3.5□□□□□ -1.85
UBR4-209ENST00000465036 PLCXD3Q63HM9 321 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 OR2A2Q6IF42 318 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 TMEM53Q6P2H8 277 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 DEGS2Q6QHC5 323 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 PAQR6Q6TCH4 344 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 DHRS11Q6UWP2 260 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 DPY19L2P2Q6ZN68 376 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 LANCL3Q6ZV70 420 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 RPS27LQ71UM5 84 aaKnown RBP3.5□□□□□ -1.85
UBR4-209ENST00000465036 VTCN1Q7Z7D3 282 aa3.5□□□□□ -1.85
UBR4-209ENST00000465036 TPRA1Q86W33 373 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms