RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 ALPLP05186 524 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 LCKP06239 509 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 POLR2IP36954 125 aaKnown RBP12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 WNT5AP41221 380 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 ATP5J2P56134 94 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 RAB35Q15286 201 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 ELFN2Q5R3F8 820 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 LINC01590Q5TEZ4 76 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 SLX4IPQ5VYV7 408 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 LYPD4Q6UWN0 246 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 UNQ6126/PRO20091Q6UXV3 157 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 CBR4Q8N4T8 237 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 C9orf16Q9BUW7 83 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 GABARAPL3Q9BY60 117 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 RIBC2Q9H4K1 309 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 WDR76Q9H967 626 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 HINT3Q9NQE9 182 aaKnown RBP12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 USE1Q9NZ43 259 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 GDF2Q9UK05 429 aaPredicted RBP12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 ORC6Q9Y5N6 252 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 COMMD3-BMI1R4GMX3 469 aa12.5□□□□□ -0.41
SQSTM1-205ENST00000464493 ITPR3Q14573 2671 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 TMEM129A0AVI4 362 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 ERICH4A6NGS2 130 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 GSTT1P30711 240 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 RPS27P42677 84 aaKnown RBP12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 EVX1P49640 407 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 ENTPD1P49961 510 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 ALDH3A2P51648 485 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 SNRPD2P62316 118 aaKnown RBP12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 PCK2Q16822 640 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 MSMPQ1L6U9 139 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 KLHL12Q53G59 568 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 TEX30Q5JUR7 227 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 C12orf73Q69YU5 71 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 RGS7BPQ6MZT1 257 aaPredicted RBP12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 TMEM154Q6P9G4 183 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 ARL9Q6T311 187 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 CFAP77Q6ZQR2 320 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 CXXC5Q7LFL8 322 aaKnown RBP12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 C1orf174Q8IYL3 243 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 ZNF101Q8IZC7 436 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 OR1J1Q8NGS3 322 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 SLC7A6Q92536 515 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 MRPL24Q96A35 216 aaKnown RBP12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 C4orf45Q96LM5 186 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 PITX2Q99697 317 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 DOK1Q99704 481 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 COQ7Q99807 217 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 MRPL37Q9BZE1 423 aaKnown RBP12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 HDHD2Q9H0R4 259 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 ELOVL3Q9HB03 270 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 ATPIF1Q9UII2 106 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 FBXO9Q9UK97 447 aaPredicted RBP12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 FZR1Q9UM11 496 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 GRIP1Q9Y3R0 1128 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 ARFGEF3Q5TH69 2177 aa12.49□□□□□ -0.41
SQSTM1-205ENST00000464493 PRODHO43272 600 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 TLX2O43763 284 aaPredicted RBP12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 PRKYO43930 277 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 ICMTO60725 284 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 ABHD16AO95870 558 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 DBHP09172 617 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 SPARCP09486 303 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 RAD23AP54725 363 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 ERVS71-1P61550 626 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 EFNB1P98172 346 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 ECH1Q13011 328 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 SLC35D3Q5M8T2 416 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 SHEQ5VZ18 495 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 PRSS57Q6UWY2 283 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 SPNS3Q6ZMD2 512 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 ZBTB49Q6ZSB9 765 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 BBS1Q8NFJ9 593 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 ABHD4Q8TB40 342 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 EME1Q96AY2 570 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 MAP6Q96JE9 813 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 INTS14Q96SY0 518 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 DUSP13Q9UII6 198 aa12.48□□□□□ -0.41
SQSTM1-205ENST00000464493 CELSR1Q9NYQ6 3014 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 H7C417 338 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 NGFP01138 241 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 PSKH1P11801 424 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 ZNF250P15622 560 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 SLC2A5P22732 501 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 SELENOVP59797 346 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 RPS7P62081 194 aaKnown RBP12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 APOFQ13790 326 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 RSPO1Q2MKA7 263 aaPredicted RBP12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 ZNF718Q3SXZ3 478 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 DCXRQ7Z4W1 244 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 LRP11Q86VZ4 500 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 ERI1Q8IV48 349 aaKnown RBP12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 TCEANCQ8N8B7 351 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 SYNPRQ8TBG9 265 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 ZMYND19Q96E35 227 aaPredicted RBP12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 DCLRE1CQ96SD1 692 aaKnown RBP12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 SLC29A1Q99808 456 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 ATF6BQ99941 703 aa12.47□□□□□ -0.41
SQSTM1-205ENST00000464493 SYT3Q9BQG1 590 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms