RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 CLMPQ9H6B4 373 aa3.12□□□□□ -1.91
USP25-207ENST00000464435 CWH43Q9H720 699 aa3.12□□□□□ -1.91
USP25-207ENST00000464435 BEX1Q9HBH7 125 aa3.12□□□□□ -1.91
USP25-207ENST00000464435 TMEM165Q9HC07 324 aa3.12□□□□□ -1.91
USP25-207ENST00000464435 SLCO1B3Q9NPD5 702 aa3.12□□□□□ -1.91
USP25-207ENST00000464435 EXD2Q9NVH0 621 aa3.12□□□□□ -1.91
USP25-207ENST00000464435 ADA2Q9NZK5 511 aa3.12□□□□□ -1.91
USP25-207ENST00000464435 MTCL1Q9Y4B5 1905 aaKnown RBP3.12□□□□□ -1.91
USP25-207ENST00000464435 SBNO1A3KN83 1393 aa3.12□□□□□ -1.91
USP25-207ENST00000464435 MSH6P52701 1360 aa3.12□□□□□ -1.91
USP25-207ENST00000464435 CNTNAP1P78357 1384 aa3.12□□□□□ -1.91
USP25-207ENST00000464435 TET2Q6N021 2002 aaPredicted RBP3.11□□□□□ -1.91
USP25-207ENST00000464435 E7EWF7 191 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 H0Y9J4 135 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 RFXANKO14593 260 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 SLC19A2O60779 497 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 KLHL2O95198 593 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 TDGF1P13385 188 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 FOLR1P15328 257 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 CRISP2P16562 243 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 CNR1P21554 472 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 CRATP43155 626 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 RORCP51449 518 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 TDGF1P3P51864 188 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 ATP5J2P56134 94 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 UBE2MP61081 183 aaKnown RBP3.11□□□□□ -1.91
USP25-207ENST00000464435 ZNF92Q03936 586 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 ZNF33AQ06730 810 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 SIGLEC14Q08ET2 396 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 NCF4Q15080 339 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 SF3A2Q15428 464 aaKnown RBP3.11□□□□□ -1.91
USP25-207ENST00000464435 SGCAQ16586 387 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 SPESP1Q6UW49 350 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 ZNF621Q6ZSS3 439 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 CMC1Q7Z7K0 106 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 APRG1Q8IVJ8 170 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 C17orf78Q8N4C9 275 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 TRAM1L1Q8N609 369 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 EID2Q8N6I1 236 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 ZNF433Q8N7K0 673 aaPredicted RBP3.11□□□□□ -1.91
USP25-207ENST00000464435 DNAAF3Q8N9W5 541 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 SLC7A13Q8TCU3 470 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 KCTD14Q9BQ13 255 aaPredicted RBP3.11□□□□□ -1.91
USP25-207ENST00000464435 ZYG11BQ9C0D3 744 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 VCX3AQ9NNX9 186 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 FGF20Q9NP95 211 aaPredicted RBP3.11□□□□□ -1.91
USP25-207ENST00000464435 ZNF331Q9NQX6 463 aaPredicted RBP3.11□□□□□ -1.91
USP25-207ENST00000464435 NKIRAS1Q9NYS0 192 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 SLC25A37Q9NYZ2 338 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 DEC1Q9P2X7 70 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 ENPP5Q9UJA9 477 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 SLC22A14Q9Y267 594 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 SLC17A4Q9Y2C5 497 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 HEBP2Q9Y5Z4 205 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 AK9Q5TCS8 1911 aa3.11□□□□□ -1.91
USP25-207ENST00000464435 A0A1B0GVI7 797 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 PRSS37A4D1T9 235 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 A6NDX4 124 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 EIF4E2O60573 245 aaKnown RBP3.1□□□□□ -1.91
USP25-207ENST00000464435 ENTPD5O75356 428 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 NDUFS6O75380 124 aaKnown RBP3.1□□□□□ -1.91
USP25-207ENST00000464435 LCA5LO95447 670 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 CLIC3O95833 236 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 DCNP07585 359 aaKnown RBP3.1□□□□□ -1.91
USP25-207ENST00000464435 MGMTP16455 207 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 CD40LGP29965 261 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 TNFSF9P41273 254 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 RPS10P46783 165 aaKnown RBP3.1□□□□□ -1.91
USP25-207ENST00000464435 TFPI2P48307 235 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 NCBP2P52298 156 aaKnown RBP eCLIP3.1□□□□□ -1.91
USP25-207ENST00000464435 CRISP1P54107 249 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 CRISP3P54108 245 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 UBE2IP63279 158 aaKnown RBP3.1□□□□□ -1.91
USP25-207ENST00000464435 MRPS15P82914 257 aaKnown RBP3.1□□□□□ -1.91
USP25-207ENST00000464435 TSC22D1Q15714 1073 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 GUCA2BQ16661 112 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 RFX4Q33E94 735 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 ZNF470Q6ECI4 717 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 PTRHD1Q6GMV3 140 aaKnown RBP3.1□□□□□ -1.91
USP25-207ENST00000464435 FRMPD2BQ6IN97 320 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 ZNF530Q6P9A1 599 aaPredicted RBP3.1□□□□□ -1.91
USP25-207ENST00000464435 LINC00173Q6ZV60 143 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 FAM122BQ7Z309 247 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 CYP4Z1Q86W10 505 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 PLCZ1Q86YW0 608 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 NELFCDQ8IXH7 590 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 Q8N9W7 124 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 OR1N2Q8NGR9 330 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 OR2G3Q8NGZ4 309 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 RNF185Q96GF1 192 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 TSSK3Q96PN8 268 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 OSBPL10Q9BXB5 764 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 UPF3BQ9BZI7 483 aaKnown RBP3.1□□□□□ -1.91
USP25-207ENST00000464435 ASB8Q9H765 288 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 ANKHQ9HCJ1 492 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 RETNQ9HD89 108 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 HRASLS2Q9NWW9 162 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 CBY1Q9Y3M2 126 aa3.1□□□□□ -1.91
USP25-207ENST00000464435 F11RQ9Y624 299 aaKnown RBP3.1□□□□□ -1.91
USP25-207ENST00000464435 UBN2Q6ZU65 1347 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms