RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 MS4A7Q9GZW8 240 aaPredicted RBP18.98■□□□□ 0.63
USP4-208ENST00000464168 GCM1Q9NP62 436 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 OR5V1Q9UGF6 321 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 ADAM18Q9Y3Q7 739 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 SOX21Q9Y651 276 aaPredicted RBP18.98■□□□□ 0.63
USP4-208ENST00000464168 NOTCH1P46531 2555 aa18.98■□□□□ 0.63
USP4-208ENST00000464168 MRASO14807 208 aa18.97■□□□□ 0.63
USP4-208ENST00000464168 FFAR1O14842 300 aa18.97■□□□□ 0.63
USP4-208ENST00000464168 IGHV4-38-2P0DP08 117 aa18.97■□□□□ 0.63
USP4-208ENST00000464168 ZNF26P17031 533 aaPredicted RBP18.97■□□□□ 0.63
USP4-208ENST00000464168 IFNA8P32881 189 aa18.97■□□□□ 0.63
USP4-208ENST00000464168 IL13RA1P78552 427 aa18.97■□□□□ 0.63
USP4-208ENST00000464168 OFCC1Q8IZS5 231 aa18.97■□□□□ 0.63
USP4-208ENST00000464168 OR52E2Q8NGJ4 325 aa18.97■□□□□ 0.63
USP4-208ENST00000464168 FNDC11Q9BVV2 318 aa18.97■□□□□ 0.63
USP4-208ENST00000464168 GRHPRQ9UBQ7 328 aa18.97■□□□□ 0.63
USP4-208ENST00000464168 LRCH1Q9Y2L9 728 aa18.97■□□□□ 0.63
USP4-208ENST00000464168 POM121CA8CG34 1229 aa18.96■□□□□ 0.63
USP4-208ENST00000464168 FAM220BPB1ANY3 271 aa18.96■□□□□ 0.63
USP4-208ENST00000464168 J3KTA2 159 aa18.96■□□□□ 0.63
USP4-208ENST00000464168 MMP16P51512 607 aa18.96■□□□□ 0.63
USP4-208ENST00000464168 TRAM2Q15035 370 aa18.96■□□□□ 0.63
USP4-208ENST00000464168 OTPQ5XKR4 325 aa18.96■□□□□ 0.63
USP4-208ENST00000464168 C1orf94Q6P1W5 598 aa18.96■□□□□ 0.63
USP4-208ENST00000464168 TREML4Q6UXN2 200 aa18.96■□□□□ 0.63
USP4-208ENST00000464168 C9orf139Q6ZV77 190 aa18.96■□□□□ 0.63
USP4-208ENST00000464168 MUC20Q8N307 709 aaPredicted RBP18.96■□□□□ 0.63
USP4-208ENST00000464168 FAM156AQ8NDB6 213 aa18.96■□□□□ 0.63
USP4-208ENST00000464168 Q96M85 177 aa18.96■□□□□ 0.63
USP4-208ENST00000464168 COG8Q96MW5 612 aa18.96■□□□□ 0.63
USP4-208ENST00000464168 TMEM165Q9HC07 324 aa18.96■□□□□ 0.63
USP4-208ENST00000464168 IGHV3OR16-10A0A075B7F0 116 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 PRSS37A4D1T9 235 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 OR6C6A6NF89 314 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 CDC42EP2O14613 210 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 AHCYL1O43865 530 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 CD14P08571 375 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 PPIAL4GP0DN37 164 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 RAC2P15153 192 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 CTLA4P16410 223 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 RPL4P36578 427 aaKnown RBP18.95■□□□□ 0.62
USP4-208ENST00000464168 SLC9A3P48764 834 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 GUCY1A3Q02108 690 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 HLXQ14774 488 aaPredicted RBP18.95■□□□□ 0.62
USP4-208ENST00000464168 MESTQ5EB52 335 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 LEG1Q6P5S2 330 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 TBPL2Q6SJ96 375 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 VTCN1Q7Z7D3 282 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 JAZF1Q86VZ6 243 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 RNF113BQ8IZP6 322 aaKnown RBP18.95■□□□□ 0.62
USP4-208ENST00000464168 OR5AS1Q8N127 324 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 ATG16L2Q8NAA4 619 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 OR2T12Q8NG77 320 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 SSBP3Q9BWW4 388 aaPredicted RBP18.95■□□□□ 0.62
USP4-208ENST00000464168 TMEM120AQ9BXJ8 343 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 IL20RAQ9UHF4 553 aa18.95■□□□□ 0.62
USP4-208ENST00000464168 A0A087WUU8 490 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 TEX13CA0A0J9YWL9 993 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 BBIP1A8MTZ0 92 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 HMGB1P1B2RPK0 211 aaPredicted RBP18.94■□□□□ 0.62
USP4-208ENST00000464168 IFNL4K9M1U5 179 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 ZNF205O95201 554 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 CPT2P23786 658 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 MTNR1AP48039 350 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 KLF10Q13118 480 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 AQP6Q13520 282 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 FAM122BQ7Z309 247 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 PARP8Q8N3A8 854 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 PCYOX1LQ8NBM8 494 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 ZNF420Q8TAQ5 688 aaPredicted RBP18.94■□□□□ 0.62
USP4-208ENST00000464168 ACOT11Q8WXI4 607 aaPredicted RBP18.94■□□□□ 0.62
USP4-208ENST00000464168 LZICQ8WZA0 190 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 DACT3Q96B18 629 aaPredicted RBP18.94■□□□□ 0.62
USP4-208ENST00000464168 UPRTQ96BW1 309 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 ASH2LQ9UBL3 628 aa18.94■□□□□ 0.62
USP4-208ENST00000464168 LOC100653049A0A140TA62 436 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 XKRYO14609 159 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 KRT34O76011 436 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 PLATP00750 562 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 IFNW1P05000 195 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 DBHP09172 617 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 GPR4P46093 362 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 ZBED5Q49AG3 693 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 CCDC92Q53HC0 331 aaPredicted RBP18.93■□□□□ 0.62
USP4-208ENST00000464168 OR2T2Q6IF00 324 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 SLC27A4Q6P1M0 643 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 LRRN1Q6UXK5 716 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 FBXW12Q6X9E4 464 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 ZNF730Q6ZMV8 503 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 TMPRSS11FQ6ZWK6 438 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 MBOAT2Q6ZWT7 520 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 KLBQ86Z14 1044 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 OR10AD1Q8NGE0 317 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 OR1F12Q8NHA8 337 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 MEGF10Q96KG7 1140 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 SLITRK2Q9H156 845 aa18.93■□□□□ 0.62
USP4-208ENST00000464168 ELOVL7A1L3X0 281 aa18.92■□□□□ 0.62
USP4-208ENST00000464168 GPANK1O95872 356 aa18.92■□□□□ 0.62
USP4-208ENST00000464168 CYB5R3P00387 301 aaPredicted RBP18.92■□□□□ 0.62
USP4-208ENST00000464168 RPS2P15880 293 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms