RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 IL18Q14116 193 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 PCK2Q16822 640 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 SLC25A47Q6Q0C1 308 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 SAMD12Q8N8I0 201 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 TRMT10AQ8TBZ6 339 aaKnown RBP12.87□□□□□ -0.35
HDAC6-213ENST00000462730 KCNE4Q8WWG9 221 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 SFXN2Q96NB2 322 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 MFRPQ9BY79 579 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 SRXN1Q9BYN0 137 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 ZFP64Q9NPA5 681 aa12.87□□□□□ -0.35
HDAC6-213ENST00000462730 FBXO9Q9UK97 447 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-213ENST00000462730 BOKQ9UMX3 212 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-213ENST00000462730 FAM240BA0A1B0GVZ2 78 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 H0YC42 278 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 H3BSH0 61 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 PDCD5O14737 125 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 CRYZL1O95825 349 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 PAHP00439 452 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 EPXP11678 715 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 ATF1P18846 271 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 GZMKP49863 264 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 P2RX3P56373 397 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 CLDN20P56880 219 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 FOXO1Q12778 655 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 CLN3Q13286 438 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 RIN1Q13671 783 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 WIPI1Q5MNZ9 446 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-213ENST00000462730 CORO6Q6QEF8 472 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 OR10AC1Q8NH08 325 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 ST7LQ8TDW4 575 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 UPRTQ96BW1 309 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 NLKQ9UBE8 527 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 SLC22A13Q9Y226 551 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 DCHS1Q96JQ0 3298 aa12.86□□□□□ -0.35
HDAC6-213ENST00000462730 A0A0B4J203 849 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 NPIPA2E9PIF3 369 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 NPIPA3F8WFD2 350 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 EIF1AYO14602 144 aaKnown RBP12.85□□□□□ -0.35
HDAC6-213ENST00000462730 TLX3O43711 291 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-213ENST00000462730 PNPP00491 289 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 C1QBP02746 253 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 EIF4EP06730 217 aaKnown RBP12.85□□□□□ -0.35
HDAC6-213ENST00000462730 CCR9P51686 369 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 TNK1Q13470 666 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 CATSPERDQ86XM0 798 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 OR2M7Q8NG81 312 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 GPR148Q8TDV2 347 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 MCHR2Q969V1 340 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 GFI1Q99684 422 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 KCNJ15Q99712 375 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 FAM173AQ9BQD7 235 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 ZCCHC4Q9H5U6 513 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 SEC61A2Q9H9S3 476 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 EMC7Q9NPA0 242 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 EXTL2Q9UBQ6 330 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 FBXL3Q9UKT7 428 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 CACNA1CQ13936 2221 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 CNTRLQ7Z7A1 2325 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 ERVH48-1M5A8F1 160 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 GPR171O14626 319 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 GFRA3O60609 400 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 ZNF780AO75290 641 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-213ENST00000462730 VAMP5O95183 116 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 QDPRP09417 244 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 SNRPBP14678 240 aaKnown RBP12.85□□□□□ -0.35
HDAC6-213ENST00000462730 EIF1AXP47813 144 aaKnown RBP12.85□□□□□ -0.35
HDAC6-213ENST00000462730 CREB3L2Q70SY1 520 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 LRRC28Q86X40 367 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-213ENST00000462730 ZNF433Q8N7K0 673 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-213ENST00000462730 OR9K2Q8NGE7 335 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 OR51A4Q8NGJ6 313 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 OR5H6Q8NGV6 325 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 TSEN15Q8WW01 171 aaKnown RBP12.85□□□□□ -0.35
HDAC6-213ENST00000462730 MARVELD1Q9BSK0 173 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 SLITRK2Q9H156 845 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 TCF7L1Q9HCS4 588 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 CENPMQ9NSP4 180 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 POLR1DQ9Y2S0 133 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 MRPS18CQ9Y3D5 142 aaKnown RBP12.85□□□□□ -0.35
HDAC6-213ENST00000462730 R4GMQ9 66 aa12.85□□□□□ -0.35
HDAC6-213ENST00000462730 TRBV5-7A0A0A0MS05 114 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 DCDC2BA2VCK2 349 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 OR5H15A6NDH6 313 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 LOC400499M0QZD8 3231 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 H2BFMP0C1H6 154 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 PTPRZ1P23471 2315 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-213ENST00000462730 CDAP32320 146 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 RFC3P40938 356 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 CSNK1A1P48729 337 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 AGFG1P52594 562 aaKnown RBP12.84□□□□□ -0.35
HDAC6-213ENST00000462730 SOX8P57073 446 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 MFAP5Q13361 173 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 POU4F3Q15319 338 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 HIST3H3Q16695 136 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 GGNQ86UU5 652 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 CCDC28AQ8IWP9 274 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 SULF2Q8IWU5 870 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 OR4M1Q8NGD0 313 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 PPP1R14AQ96A00 147 aa12.84□□□□□ -0.35
HDAC6-213ENST00000462730 DHRS9Q9BPW9 319 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms