RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 SPI1P17947 270 aa13.59□□□□□ -0.23
ERCC3-206ENST00000462306 KPNB1Q14974 876 aaKnown RBP13.59□□□□□ -0.23
ERCC3-206ENST00000462306 MAD2L1BPQ15013 274 aaPredicted RBP13.59□□□□□ -0.23
ERCC3-206ENST00000462306 LYPD4Q6UWN0 246 aa13.59□□□□□ -0.23
ERCC3-206ENST00000462306 HIPK1Q86Z02 1210 aa13.59□□□□□ -0.23
ERCC3-206ENST00000462306 LINC00346Q8IVM7 164 aa13.59□□□□□ -0.23
ERCC3-206ENST00000462306 ZNF525Q8N782 197 aa13.59□□□□□ -0.23
ERCC3-206ENST00000462306 ICA1LQ8NDH6 482 aa13.59□□□□□ -0.23
ERCC3-206ENST00000462306 SYNPRQ8TBG9 265 aa13.59□□□□□ -0.23
ERCC3-206ENST00000462306 SLC7A6Q92536 515 aa13.59□□□□□ -0.23
ERCC3-206ENST00000462306 MARS2Q96GW9 593 aaKnown RBP13.59□□□□□ -0.23
ERCC3-206ENST00000462306 HCAR1Q9BXC0 346 aa13.59□□□□□ -0.23
ERCC3-206ENST00000462306 DYNLRB1Q9NP97 96 aa13.59□□□□□ -0.23
ERCC3-206ENST00000462306 ATPIF1Q9UII2 106 aa13.59□□□□□ -0.23
ERCC3-206ENST00000462306 TVP23AA6NH52 213 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 G3V2T6 193 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 M0R233 179 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 DBHP09172 617 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 ZNF3P17036 446 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 ALDH3B1P43353 468 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 KLF3P57682 345 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-206ENST00000462306 RSPO1Q2MKA7 263 aaPredicted RBP13.58□□□□□ -0.24
ERCC3-206ENST00000462306 TMEM255AQ5JRV8 349 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 ELFN2Q5R3F8 820 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 SPATA46Q5T0L3 261 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 LINC01590Q5TEZ4 76 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 CFAP77Q6ZQR2 320 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 C1orf174Q8IYL3 243 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 PARP8Q8N3A8 854 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 ABHD4Q8TB40 342 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 SLC25A40Q8TBP6 338 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 PYDC1Q8WXC3 89 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 PTP4A1Q93096 173 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 COQ7Q99807 217 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 HDHD2Q9H0R4 259 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 GABARAPL1Q9H0R8 117 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 RAB1BQ9H0U4 201 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 MS4A5Q9H3V2 200 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 MED20Q9H944 212 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 ELOVL3Q9HB03 270 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 SLC25A19Q9HC21 320 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 PAPOLBQ9NRJ5 636 aaKnown RBP13.58□□□□□ -0.24
ERCC3-206ENST00000462306 KIF17Q9P2E2 1029 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 KCNG2Q9UJ96 466 aa13.58□□□□□ -0.24
ERCC3-206ENST00000462306 IGHV4-30-2A0A087WSY4 118 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 FAM183AA6NL82 134 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 H3BNX3 289 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 SURF4O15260 269 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 MITFO75030 526 aaPredicted RBP13.57□□□□□ -0.24
ERCC3-206ENST00000462306 ABHD16AO95870 558 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 IGHV3-13P01766 116 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 HMGN1P05114 100 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 PSKH1P11801 424 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 ZNF823P16415 610 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 ZNF23P17027 643 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 FMO3P31513 532 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 MPV17P39210 176 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 RPS27P42677 84 aaKnown RBP13.57□□□□□ -0.24
ERCC3-206ENST00000462306 CRISP1P54107 249 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 DSCR9P59020 149 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 PPP1CBP62140 327 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 PCK2Q16822 640 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 KRTAP27-1Q3LI81 207 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 MBNL2Q5VZF2 373 aaKnown RBP13.57□□□□□ -0.24
ERCC3-206ENST00000462306 TMEM236Q5W0B7 351 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 KDM4DQ6B0I6 523 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 ARL9Q6T311 187 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 CLEC2AQ6UVW9 174 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 UNQ6126/PRO20091Q6UXV3 157 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 ZDHHC13Q8IUH4 622 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 ZNF511Q8NB15 262 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 OR2AJ1Q8NGZ0 328 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 KLF14Q8TD94 323 aaPredicted RBP13.57□□□□□ -0.24
ERCC3-206ENST00000462306 C10orf105Q8TEF2 133 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 CENPNQ96H22 339 aaPredicted RBP13.57□□□□□ -0.24
ERCC3-206ENST00000462306 MAP6Q96JE9 813 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 SMR3AQ99954 134 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 CDADC1Q9BWV3 514 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 REG4Q9BYZ8 158 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 OR2J1Q9GZK6 312 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 SEMA6AQ9H2E6 1030 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 TPK1Q9H3S4 243 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 GSX1Q9H4S2 264 aaPredicted RBP13.57□□□□□ -0.24
ERCC3-206ENST00000462306 WDR76Q9H967 626 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 PNRC2Q9NPJ4 139 aaKnown RBP13.57□□□□□ -0.24
ERCC3-206ENST00000462306 TBCCD1Q9NVR7 557 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 TAAR3PQ9P1P4 343 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 GRIP1Q9Y3R0 1128 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 COMMD3-BMI1R4GMX3 469 aa13.57□□□□□ -0.24
ERCC3-206ENST00000462306 A0A1W2PPW3 197 aa13.56□□□□□ -0.24
ERCC3-206ENST00000462306 RNF223E7ERA6 249 aa13.56□□□□□ -0.24
ERCC3-206ENST00000462306 SMAD7O15105 426 aaKnown RBP13.56□□□□□ -0.24
ERCC3-206ENST00000462306 SELENOVP59797 346 aa13.56□□□□□ -0.24
ERCC3-206ENST00000462306 ZNF718Q3SXZ3 478 aa13.56□□□□□ -0.24
ERCC3-206ENST00000462306 BIVMQ86UB2 503 aa13.56□□□□□ -0.24
ERCC3-206ENST00000462306 OR10S1Q8NGN2 331 aa13.56□□□□□ -0.24
ERCC3-206ENST00000462306 IPCEF1Q8WWN9 437 aaPredicted RBP13.56□□□□□ -0.24
ERCC3-206ENST00000462306 NEU4Q8WWR8 484 aaPredicted RBP13.56□□□□□ -0.24
ERCC3-206ENST00000462306 FAM168AQ92567 244 aa13.56□□□□□ -0.24
ERCC3-206ENST00000462306 DCLRE1CQ96SD1 692 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms