RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 CATSPERDQ86XM0 798 aa10.53□□□□□ -0.72
PDZRN3-203ENST00000462146 ZNF584Q8IVC4 421 aa10.53□□□□□ -0.72
PDZRN3-203ENST00000462146 KDM8Q8N371 416 aa10.53□□□□□ -0.72
PDZRN3-203ENST00000462146 C19orf47Q8N9M1 422 aaKnown RBP10.53□□□□□ -0.72
PDZRN3-203ENST00000462146 METTL21AQ8WXB1 218 aa10.53□□□□□ -0.72
PDZRN3-203ENST00000462146 ASB13Q8WXK3 278 aa10.53□□□□□ -0.72
PDZRN3-203ENST00000462146 FN3KRPQ9HA64 309 aa10.53□□□□□ -0.72
PDZRN3-203ENST00000462146 DUX4Q9UBX2 424 aa10.53□□□□□ -0.72
PDZRN3-203ENST00000462146 GMEB2Q9UKD1 530 aa10.53□□□□□ -0.72
PDZRN3-203ENST00000462146 SEC16AO15027 2179 aa10.53□□□□□ -0.72
PDZRN3-203ENST00000462146 TMEM218A2RU14 115 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 C9orf170A2RU37 121 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 PRSS37A4D1T9 235 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 OR2AT4A6NND4 320 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 SULT1C2O00338 296 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 PHYHO14832 338 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 LDLRAD4O15165 306 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 PGAM2P15259 253 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 VAMP1P23763 118 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 CD96P40200 585 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 SRSF4Q08170 494 aaKnown RBP10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 GPM6BQ13491 265 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 INPP5JQ15735 1006 aaPredicted RBP10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 RAB12Q6IQ22 244 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 SLC18B1Q6NT16 456 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 TMEM71Q6P5X7 295 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 LYG2Q86SG7 212 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 TRAPPC6BQ86SZ2 158 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 OOSP2Q86WS3 158 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 LINC00346Q8IVM7 164 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 OR13C3Q8NGS6 347 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 ROBO4Q8WZ75 1007 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 NUDT9Q9BW91 350 aa10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 PNO1Q9NRX1 252 aaKnown RBP10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 KLF2Q9Y5W3 355 aaPredicted RBP10.52□□□□□ -0.72
PDZRN3-203ENST00000462146 IGLV1-36A0A0B4J1U3 117 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 C5orf67F2Z3F1 127 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 SOX1O00570 391 aaPredicted RBP10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 HCRTR2O43614 444 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 NUDT14O95848 222 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 AKR1C4P17516 323 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 PRKXP51817 358 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 IL13RA1P78552 427 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 PRTGQ2VWP7 1150 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 FAM109BQ6ICB4 259 aaPredicted RBP10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 WDFY1Q8IWB7 410 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 HERVK_113Q902F9 699 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 GABRG3Q99928 467 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 SELENOIQ9C0D9 397 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 PIGMQ9H3S5 423 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 ESRP2Q9H6T0 727 aaKnown RBP10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 PRR13Q9NZ81 148 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 CKLFQ9UBR5 152 aa10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 MRPS33Q9Y291 106 aaKnown RBP10.52□□□□□ -0.73
PDZRN3-203ENST00000462146 LOC107986453A0A1B0GWG9 222 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 ZNF98A6NK75 572 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 IL11P20809 199 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 DNASE1L1P49184 302 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 RIDAP52758 137 aaKnown RBP10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 ZP2Q05996 745 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 BIKQ13323 160 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 VWA2Q5GFL6 755 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 HAGHLQ6PII5 290 aaPredicted RBP10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 SLC25A42Q86VD7 318 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 BHLHE23Q8NDY6 225 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 GAL3ST4Q96RP7 486 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 OR8D2Q9GZM6 311 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 SCPEP1Q9HB40 452 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 MYOZ1Q9NP98 299 aaPredicted RBP10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 RHBDD3Q9Y3P4 386 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 C13orf42A0A1B0GVH6 325 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 CLDN4O14493 209 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 CD2P06729 351 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 CA3P07451 260 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 HLA-DOBP13765 273 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 CXCR1P25024 350 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 HRH1P35367 487 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 HHEXQ03014 270 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 RNASE10Q5GAN6 216 aaKnown RBP10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 RNF144BQ7Z419 303 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 CHST4Q8NCG5 386 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 OR5AP2Q8NGF4 316 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 OR5T2Q8NGG2 359 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 ZNF519Q8TB69 540 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 MRGPRX1Q96LB2 322 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 ADAM19Q9H013 955 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 GDF2Q9UK05 429 aaPredicted RBP10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 COA3Q9Y2R0 106 aaPredicted RBP10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 A0A0B4J2A0 478 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 H7C2Y5 167 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 P2RY10O00398 339 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 IL33O95760 270 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 ERCC1P07992 297 aaPredicted RBP10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 EN2P19622 333 aaPredicted RBP10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 SLC37A1P57057 533 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 RPL27P61353 136 aaKnown RBP10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 FMODQ06828 376 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 UNC119Q13432 240 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 TOMM20Q15388 145 aa10.51□□□□□ -0.73
PDZRN3-203ENST00000462146 ZNF260Q3ZCT1 412 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms