RNA–Protein interactions for RNA: ENST00000460328.5

TTC3-211, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-211ENST00000460328 EXOSC4Q9NPD3 245 aaKnown RBP1.3□□□□□ -2.2
TTC3-211ENST00000460328 SAMSN1Q9NSI8 373 aaKnown RBP1.3□□□□□ -2.2
TTC3-211ENST00000460328 C21orf62Q9NYP8 219 aa1.3□□□□□ -2.2
TTC3-211ENST00000460328 DUX4Q9UBX2 424 aa1.3□□□□□ -2.2
TTC3-211ENST00000460328 A0A1W2PPE3 182 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 ZNF878C9JN71 531 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 NDUFB10O96000 172 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 IL1BP01584 269 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 RAB3AP20336 220 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 IFNAR2P48551 515 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 UBE2HP62256 183 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 TGM3Q08188 693 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 ZNF235Q14590 738 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 KRTAP13-4Q3LI77 160 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 ADNP2Q6IQ32 1131 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 CASP12Q6UXS9 341 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 ZSCAN30Q86W11 494 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 LRRC75A-AS1Q8N1F1 130 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 MS4A15Q8N5U1 240 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 SPANXA2-OT1Q8N9U9 137 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 OR10AD1Q8NGE0 317 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 SLC7A13Q8TCU3 470 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 UBE2Q2Q8WVN8 375 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 PIBF1Q8WXW3 757 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 GALNT14Q96FL9 552 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 SLC41A3Q96GZ6 507 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 IP6K3Q96PC2 410 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 OR5B12Q96R08 314 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 TMEM9BQ9NQ34 198 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 LSM7Q9UK45 103 aaKnown RBP1.29□□□□□ -2.2
TTC3-211ENST00000460328 SIGLEC7Q9Y286 467 aa1.29□□□□□ -2.2
TTC3-211ENST00000460328 DDX49Q9Y6V7 483 aaKnown RBP1.29□□□□□ -2.2
TTC3-211ENST00000460328 CDC7O00311 574 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 NUPL2O15504 423 aaKnown RBP1.28□□□□□ -2.2
TTC3-211ENST00000460328 EEDO75530 441 aaKnown RBP1.28□□□□□ -2.2
TTC3-211ENST00000460328 CNMDO75829 334 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 IGLV6-57P01721 117 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 SERPIND1P05546 499 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 CTSLP07711 333 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 CD37P11049 281 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 DESP17661 470 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 SSR4P51571 173 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 TPMTP51580 245 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 TCEAL5Q5H9L2 206 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 C6orf226Q5I0X4 101 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 FAM222AQ5U5X8 452 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 KDELC1Q6UW63 502 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 ADM2Q7Z4H4 148 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 COX18Q8N8Q8 333 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 OR5B3Q8NH48 314 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 TCEAL3Q969E4 200 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 TBC1D31Q96DN5 1066 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 ZNF317Q96PQ6 595 aaPredicted RBP1.28□□□□□ -2.2
TTC3-211ENST00000460328 RSG1Q9BU20 258 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 ROPN1BQ9BZX4 212 aaPredicted RBP1.28□□□□□ -2.2
TTC3-211ENST00000460328 ZNF407Q9C0G0 2248 aa1.28□□□□□ -2.2
TTC3-211ENST00000460328 TRIP11Q15643 1979 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 TRAV6A0A075B6T7 132 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 GLYATL1P3A0A0U1RQE8 302 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 OR52A4PA6NMU1 304 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 CEACAM18A8MTB9 384 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 NDUFC2-KCTD14E9PQ53 114 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 SLC22A5O76082 557 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 CYB5R3P00387 301 aaPredicted RBP1.27□□□□□ -2.21
TTC3-211ENST00000460328 GPX4P36969 197 aaPredicted RBP1.27□□□□□ -2.21
TTC3-211ENST00000460328 CEBPDP49716 269 aaPredicted RBP1.27□□□□□ -2.21
TTC3-211ENST00000460328 CCNHP51946 323 aaPredicted RBP1.27□□□□□ -2.21
TTC3-211ENST00000460328 LINC00336Q6ZUF6 198 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 NIPA1Q7RTP0 329 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 TGIF2LXQ8IUE1 241 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 ZNF101Q8IZC7 436 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 OR2L3Q8NG85 312 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 ATP5SQ99766 215 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 SLC39A3Q9BRY0 314 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 FGF20Q9NP95 211 aaPredicted RBP1.27□□□□□ -2.21
TTC3-211ENST00000460328 IKZF2Q9UKS7 526 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 VANGL2Q9ULK5 521 aa1.27□□□□□ -2.21
TTC3-211ENST00000460328 IGKV1-8A0A0C4DH67 115 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 IGHV7-4-1A0A0J9YVY3 117 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 CLRN2A0PK11 232 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 GABRR3A8MPY1 467 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 KRBOX1C9JBD0 128 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 J3QRE1 110 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 MANBAO00462 879 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 NVLO15381 856 aaKnown RBP1.26□□□□□ -2.21
TTC3-211ENST00000460328 CLPXO76031 633 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 KLHL2O95198 593 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 SERPINA5P05154 406 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 GGT1P19440 569 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 SYKP43405 635 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 PSMD8P48556 350 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 CSNK1EP49674 416 aaKnown RBP1.26□□□□□ -2.21
TTC3-211ENST00000460328 PRLHRP49683 370 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 PPP1CBP62140 327 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 RPL23P62829 140 aaKnown RBP1.26□□□□□ -2.21
TTC3-211ENST00000460328 FAM53BQ14153 422 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 YIF1BQ5BJH7 314 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 STUMQ69YW2 141 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 HCP5Q6MZN7 132 aa1.26□□□□□ -2.21
TTC3-211ENST00000460328 NKAIN4Q8IVV8 208 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms