RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 RNF4P78317 190 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 LINC00696Q6ZRV3 163 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 SYT13Q7L8C5 426 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 OR5T1Q8NG75 326 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 MRGPRX4Q96LA9 322 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 OCSTAMPQ9BR26 566 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 NUDT9Q9BW91 350 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 CNTNAP3Q9BZ76 1288 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 HRH3Q9Y5N1 445 aa13.39□□□□□ -0.27
PTPRU-205ENST00000460170 SNRPGP15A8MWD9 76 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 ATF1P18846 271 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 TBXA2RP21731 343 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 MZT1Q08AG7 82 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 OGFOD3Q6PK18 319 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 OR4D6Q8NGJ1 314 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 KIF25Q9UIL4 384 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 NRG2O14511 850 aaPredicted RBP13.38□□□□□ -0.27
PTPRU-205ENST00000460170 IFNA17P01571 189 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 CHATP28329 748 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 INSL4Q14641 139 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 GPR84Q9NQS5 396 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 CDC42EP2O14613 210 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 MSTNO14793 375 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 AKR7A2O43488 359 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 SNRNP70P08621 437 aaKnown RBP13.38□□□□□ -0.27
PTPRU-205ENST00000460170 GPBAR1Q8TDU6 330 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 GCDHQ92947 438 aaPredicted RBP13.38□□□□□ -0.27
PTPRU-205ENST00000460170 OR14J1Q9UGF5 321 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 TRPM6Q9BX84 2022 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 HSPB6O14558 160 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 CSRP3P50461 194 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 SLC25A1P53007 311 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 CAMK2BQ13554 666 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 OR10K2Q6IF99 312 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 THSD4Q6ZMP0 1018 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 UBE3DQ7Z6J8 389 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 SGK3Q96BR1 496 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 SLC52A3Q9NQ40 469 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 FBXO7Q9Y3I1 522 aa13.38□□□□□ -0.27
PTPRU-205ENST00000460170 NME1P15531 152 aaKnown RBP13.37□□□□□ -0.27
PTPRU-205ENST00000460170 COL9A1P20849 921 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 NME2P22392 152 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 RAB31Q13636 194 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 FXNQ16595 210 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 MRM1Q6IN84 353 aaKnown RBP13.37□□□□□ -0.27
PTPRU-205ENST00000460170 KIAA0907Q7Z7F0 614 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-205ENST00000460170 OR4D11Q8NGI4 311 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 TTC9Q92623 222 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 PFDN5Q99471 154 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 CRISPLD2Q9H0B8 497 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 PLSCR3Q9NRY6 295 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 NECAP2Q9NVZ3 263 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 TRAPPC2LQ9UL33 140 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 SLC5A6Q9Y289 635 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 OR2J2O76002 312 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 OXGR1Q96P68 337 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 SPACA5Q96QH8 159 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 LHX6Q9UPM6 363 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 TNFSF12O43508 249 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 XRCC3O43542 346 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 POU2F2P09086 479 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 OMGP23515 440 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 PPT1P50897 306 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 FZD2Q14332 565 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 MSMO1Q15800 293 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 SPEM1Q8N4L4 309 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 OR1N1Q8NGS0 311 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 OTOSQ8NHW6 89 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 OR8B4Q96RC9 309 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 BCO1Q9HAY6 547 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 WBP1LQ9NX94 342 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 PLSCR5A0PG75 271 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 SUMO3P55854 103 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-205ENST00000460170 UBE2MP61081 183 aaKnown RBP13.37□□□□□ -0.27
PTPRU-205ENST00000460170 TAS2R5Q9NYW4 299 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 PLXNB2O15031 1838 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 PHF1O43189 567 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-205ENST00000460170 ICMTO60725 284 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 ALOX5APP20292 161 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 ALDH3B1P43353 468 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 GPR3P46089 330 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 AADACL3Q5VUY0 350 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 YRDCQ86U90 279 aaKnown RBP13.37□□□□□ -0.27
PTPRU-205ENST00000460170 NUDCD2Q8WVJ2 157 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 GABRG3Q99928 467 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 PBOV1Q9GZY1 135 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 ADGRL4Q9HBW9 690 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 TP53TG5Q9Y2B4 290 aa13.37□□□□□ -0.27
PTPRU-205ENST00000460170 CBX7O95931 251 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 ZFP36L2P47974 494 aaKnown RBP13.36□□□□□ -0.27
PTPRU-205ENST00000460170 TMEM71Q6P5X7 295 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 DND1Q8IYX4 353 aaKnown RBP13.36□□□□□ -0.27
PTPRU-205ENST00000460170 ZNF680Q8NEM1 530 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 OR2AK2Q8NG84 335 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 OR56B2PQ8NGI1 322 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 IFI44Q8TCB0 444 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 FER1L6-AS2Q96M78 137 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 CMTM3Q96MX0 182 aa13.36□□□□□ -0.27
PTPRU-205ENST00000460170 SLC17A2O00624 439 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms