RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 SPATC1Q76KD6 591 aa8.73□□□□□ -1.01
HDLBP-227ENST00000458564 VASH1Q7L8A9 365 aaPredicted RBP8.73□□□□□ -1.01
HDLBP-227ENST00000458564 OR8J3Q8NGG0 315 aa8.73□□□□□ -1.01
HDLBP-227ENST00000458564 RAB40AQ8WXH6 277 aa8.73□□□□□ -1.01
HDLBP-227ENST00000458564 CMBLQ96DG6 245 aa8.73□□□□□ -1.01
HDLBP-227ENST00000458564 PRRC1Q96M27 445 aa8.73□□□□□ -1.01
HDLBP-227ENST00000458564 SH3GL1Q99961 368 aa8.73□□□□□ -1.01
HDLBP-227ENST00000458564 A0A1B0GWJ7 208 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 OR6C6A6NF89 314 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 SRRM5B3KS81 715 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 AHCYL1O43865 530 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 SHOX2O60902 331 aaPredicted RBP8.72□□□□□ -1.01
HDLBP-227ENST00000458564 IFNA14P01570 189 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 SCG5P05408 212 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 IFI30P13284 250 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 OR1E2P47887 323 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 RGS6P49758 472 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 ERFP50548 548 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 GNB2P62879 340 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 AQP6Q13520 282 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 CYLC2Q14093 348 aaPredicted RBP8.72□□□□□ -1.01
HDLBP-227ENST00000458564 BEND6Q5SZJ8 279 aaPredicted RBP8.72□□□□□ -1.01
HDLBP-227ENST00000458564 ERICH5Q6P6B1 374 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 FBXW12Q6X9E4 464 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 IGFN1Q86VF2 1251 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 KLBQ86Z14 1044 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 POU5F2Q8N7G0 328 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 PCYOX1LQ8NBM8 494 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 C10orf82Q8WW14 230 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 TAF15Q92804 592 aaKnown RBP eCLIP8.72□□□□□ -1.013e-9■□□□□ 8.5
HDLBP-227ENST00000458564 PTP4A1Q93096 173 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 PLEKHA8Q96JA3 519 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 MEGF10Q96KG7 1140 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 MAGEB18Q96M61 343 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 TMEM165Q9HC07 324 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 EMC7Q9NPA0 242 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 MIOXQ9UGB7 285 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 A4GNTQ9UNA3 340 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 STARD10Q9Y365 291 aa8.72□□□□□ -1.01
HDLBP-227ENST00000458564 IGHV3OR16-10A0A075B7F0 116 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 TRAV27A0A087WT01 109 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 TEX13CA0A0J9YWL9 993 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 KIR2DS1A0A191URI9 304 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 MDFIC2A0A1B0GVS7 189 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 FBP2O00757 339 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 PHYHO14832 338 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 HOXA3O43365 443 aaPredicted RBP8.71□□□□□ -1.02
HDLBP-227ENST00000458564 NDUFA7O95182 113 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 GPANK1O95872 356 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 KNG1P01042 644 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 NPPAP01160 153 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 SLC9A3P48764 834 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 SRP9P49458 86 aaKnown RBP8.71□□□□□ -1.02
HDLBP-227ENST00000458564 RPL15P61313 204 aaKnown RBP8.71□□□□□ -1.02
HDLBP-227ENST00000458564 LSM6P62312 80 aaKnown RBP8.71□□□□□ -1.02
HDLBP-227ENST00000458564 ZNF404Q494X3 552 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 RABL3Q5HYI8 236 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 COQ5Q5HYK3 327 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 METTL21CQ5VZV1 264 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 NLRC3Q7RTR2 1065 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 OAFQ86UD1 273 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 OFCC1Q8IZS5 231 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 TMEM86BQ8N661 226 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 OR8G5Q8NG78 346 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 OR10AD1Q8NGE0 317 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 OR13G1Q8NGZ3 307 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 OR4F5Q8NH21 305 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 OR51A7Q8NH64 312 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 RASD2Q96D21 266 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 NEIL1Q96FI4 390 aaPredicted RBP8.71□□□□□ -1.02
HDLBP-227ENST00000458564 CITED1Q99966 193 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 ECSITQ9BQ95 431 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 TMEM246Q9BRR3 403 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 BEX1Q9HBH7 125 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 NOX4Q9NPH5 578 aa8.71□□□□□ -1.02
HDLBP-227ENST00000458564 SOX21Q9Y651 276 aaPredicted RBP8.71□□□□□ -1.02
HDLBP-227ENST00000458564 PRSS37A4D1T9 235 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 FAM181BA6NEQ2 426 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 H7C1C5 153 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 CD14P08571 375 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 CTLA4P16410 223 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 FUT4P22083 530 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 OMGP23515 440 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 IFNA8P32881 189 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 GATA4P43694 442 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 PITPNBP48739 271 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 RAG2P55895 527 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 LCN6P62502 163 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 PRKCDQ05655 676 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 DEFB112Q30KQ8 113 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 CYBRD1Q53TN4 286 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 MESTQ5EB52 335 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 C17orf107Q6ZR85 190 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 FAM122BQ7Z309 247 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 JAZF1Q86VZ6 243 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 NRMQ8IXM6 262 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 RNF113BQ8IZP6 322 aaKnown RBP8.7□□□□□ -1.02
HDLBP-227ENST00000458564 C1orf87Q8N0U7 546 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 FITM2Q8N6M3 262 aa8.7□□□□□ -1.02
HDLBP-227ENST00000458564 ATG16L2Q8NAA4 619 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms