RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 UQCRBP14927 111 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 FOLR1P15328 257 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 AK4P27144 223 aaPredicted RBP4.78□□□□□ -1.64
VPS41-209ENST00000457055 SRD5A2P31213 254 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 GABRA5P31644 462 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 UQCRC1P31930 480 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 CEACAM8P31997 349 aaPredicted RBP4.78□□□□□ -1.64
VPS41-209ENST00000457055 DDOSTP39656 456 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 CDKN2DP55273 166 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 FOXL2P58012 376 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 TAS2R50P59544 299 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 SELENOTP62341 195 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 MRPS10P82664 201 aaKnown RBP4.78□□□□□ -1.64
VPS41-209ENST00000457055 SEMA3BQ13214 749 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 PSMD5Q16401 504 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 ZNF239Q16600 458 aaKnown RBP4.78□□□□□ -1.64
VPS41-209ENST00000457055 CTU2Q2VPK5 515 aaKnown RBP4.78□□□□□ -1.64
VPS41-209ENST00000457055 HLA-BQ31612 363 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 CEACAM21Q3KPI0 293 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 GGTA1PQ4G0N0 100 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 LINC01620Q4KN68 170 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 RFTN2Q52LD8 501 aaPredicted RBP4.78□□□□□ -1.64
VPS41-209ENST00000457055 SPIN4Q56A73 249 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 TCTEX1D4Q5JR98 221 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 RESP18Q5W5W9 173 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 REP15Q6BDI9 236 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 PNCKQ6P2M8 343 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.78□□□□□ -1.64
VPS41-209ENST00000457055 RBM44Q6ZP01 1051 aaKnown RBP4.78□□□□□ -1.64
VPS41-209ENST00000457055 OR2W3Q7Z3T1 314 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 PDSS2Q86YH6 399 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 DNAJC22Q8N4W6 341 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 ZNF557Q8N988 423 aaPredicted RBP4.78□□□□□ -1.64
VPS41-209ENST00000457055 Q8N9G6 341 aaPredicted RBP4.78□□□□□ -1.64
VPS41-209ENST00000457055 Q8NA96 180 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 NOXO1Q8NFA2 376 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 SLC26A10Q8NG04 563 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 OR2Y1Q8NGV0 311 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 OR4C6Q8NH72 309 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 OR14L1PQ8NHC6 308 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 TERB2Q8NHR7 220 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 NPRL2Q8WTW4 380 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 TMEM171Q8WVE6 324 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 TCTEX1D2Q8WW35 142 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 TRUB1Q8WWH5 349 aaKnown RBP4.78□□□□□ -1.64
VPS41-209ENST00000457055 SCRN2Q96FV2 425 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 MBOAT4Q96T53 435 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 LPAR4Q99677 370 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 SLC6A7Q99884 636 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 TBL1XR1Q9BZK7 514 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 KLK15Q9H2R5 256 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 TBC1D17Q9HA65 648 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 WFDC1Q9HC57 220 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 FGF21Q9NSA1 209 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 MCUBQ9NWR8 336 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 RASL12Q9NYN1 266 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 UFC1Q9Y3C8 167 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 FBXO7Q9Y3I1 522 aa4.78□□□□□ -1.64
VPS41-209ENST00000457055 BDP1A6H8Y1 2624 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 MGAMO43451 1857 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 ZCWPW2A0A1B0GU75 182 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 C20orf202A1L168 122 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 MEIOCA2RUB1 952 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 GMNCA6NCL1 334 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 SMIM9A6NGZ8 99 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 LRRC3CA6NJW4 275 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 NPIPB11E5RHQ5 1161 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 CHEK1O14757 476 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 MRASO14807 208 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 TCF21O43680 179 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 TNFSF15O95150 251 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 MPZL1O95297 269 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 GJB5O95377 273 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 C1QCP02747 245 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 CD74P04233 296 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 ALDOBP05062 364 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 SERPINA7P05543 415 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 KLK1P06870 262 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 C8GP07360 202 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 WNT2P09544 360 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 HIST1H1EP10412 219 aaKnown RBP4.77□□□□□ -1.65
VPS41-209ENST00000457055 GP9P14770 177 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 EPHA3P29320 983 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 CKS1BP61024 79 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 TLE3Q04726 772 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 FOXF2Q12947 444 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 PABPC1L2AQ5JQF8 200 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 HIST2H2AA3Q6FI13 130 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 FAM71E1Q6IPT2 247 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 CES5AQ6NT32 575 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 ATRAIDQ6UW56 229 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 ZNF841Q6ZN19 808 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 PRSS45Q7RTY3 260 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 ACOT1Q86TX2 421 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 GPSM1Q86YR5 675 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 KBTBD8Q8NFY9 601 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 OR4S2Q8NH73 311 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 OR2AE1Q8NHA4 323 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 FAM110BQ8TC76 370 aa4.77□□□□□ -1.65
VPS41-209ENST00000457055 FAM3CQ92520 227 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms