RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 PLEKHF2Q9H8W4 249 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 Q9N2K0 584 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ZFP64Q9NPA5 681 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ZNF331Q9NQX6 463 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 A4GNTQ9UNA3 340 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 SLC5A6Q9Y289 635 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 TP53TG5Q9Y2B4 290 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 TRAV36DV7A0A075B6V5 113 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 TRBV5-4A0A0C4DH59 114 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 PPM1DO15297 605 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 MBPP02686 304 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 IRS1P35568 1242 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 RPS18P62269 152 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 CATR1Q13166 79 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 IL13RA2Q14627 380 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 SURF2Q15527 256 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 GUCA2BQ16661 112 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 MEP1BQ16820 701 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 FAM74A3Q4VXF1 159 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 PRRT3Q5FWE3 981 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 NKAIN2Q5VXU1 208 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 FIGLAQ6QHK4 219 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 Q7L0L9 218 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 LRRTM3Q86VH5 581 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 RBM45Q8IUH3 476 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 GCNT2Q8N0V5 402 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ZNF687Q8N1G0 1237 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 DTD2Q96FN9 168 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 SLC6A18Q96N87 628 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 TAAR9Q96RI9 348 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 GMLQ99445 158 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 NKX3-1Q99801 234 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 JAM3Q9BX67 310 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ACTR3CQ9C0K3 210 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 GSN-AS1Q9NRJ2 163 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 SERTAD4Q9NUC0 356 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 YTHDF2Q9Y5A9 579 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 PCDHGA1Q9Y5H4 931 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 COL22A1Q8NFW1 1626 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 PKD1L3Q7Z443 1732 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 TRBV23OR9-2A0A075B6M9 112 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 C9orf170A2RU37 121 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 OGG1O15527 345 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 PHF1O43189 567 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 RNGTTO60942 597 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 HPXP02790 462 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 CRHP06850 196 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 NPPBP16860 134 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ACKR3P25106 362 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 FABP6P51161 128 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 LIM2P55344 173 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 PCBP3P57721 371 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 RPS21P63220 83 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 MRPL49Q13405 166 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 NCMAPQ5T1S8 102 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 YOD1Q5VVQ6 348 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ZNF660Q6AZW8 331 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ETFRF1Q6IPR1 90 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 OGFOD3Q6PK18 319 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 TOMM20LQ6UXN7 152 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 CYHR1Q6ZMK1 362 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ZNF836Q6ZNA1 936 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 OR5AR1Q8NGP9 310 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 INTS12Q96CB8 462 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 PIK3IP1Q96FE7 263 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ZNF764Q96H86 408 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 TIMM29Q9BSF4 260 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 OR8D2Q9GZM6 311 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 TINAGL1Q9GZM7 467 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 METTL7AQ9H8H3 244 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ISG20L2Q9H9L3 353 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 CARHSP1Q9Y2V2 147 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 LSM2Q9Y333 95 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 SLCO1B1Q9Y6L6 691 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 CXorf51AA0A1B0GTR3 108 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 LOC102725191A0A1B0GVB3 256 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 SERINC4A6NH21 518 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 FAM74A7A6NL05 159 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 K7ERQ8 282 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 SMAD6O43541 496 aaKnown RBP4.56□□□□□ -1.68
PCDH9-203ENST00000456367 CTNSO60931 367 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 LY86O95711 162 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 STATHP02808 62 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 SEC11BP0C7V7 166 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 CXCL2P19875 107 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 EPHA1P21709 976 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 SLC11A1P49279 550 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 MVDP53602 400 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 PPP1CBP62140 327 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 SMAD4Q13485 552 aaKnown RBP4.56□□□□□ -1.68
PCDH9-203ENST00000456367 DMKNQ6E0U4 476 aaPredicted RBP4.56□□□□□ -1.68
PCDH9-203ENST00000456367 CD200R1LQ6Q8B3 271 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 TMEM184AQ6ZMB5 413 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 TMPRSS11FQ6ZWK6 438 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 MISPQ8IVT2 679 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 APCDD1Q8J025 514 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 RNF175Q8N4F7 328 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 OR10A7Q8NGE5 316 aa4.56□□□□□ -1.68
PCDH9-203ENST00000456367 OR5L2Q8NGL0 311 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms