RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 A0A1W2PPW3 197 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 IFNGP01579 166 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 ANXA8P13928 327 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 ALDH3B1P43353 468 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 CENPAP49450 140 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 PDLIM4P50479 330 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 SLC25A1P53007 311 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 TEKQ02763 1124 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 LOXL1Q08397 574 aaPredicted RBP14.85□□□□□ -0.03
USP39-208ENST00000455732 MEP1BQ16820 701 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 CCDC92Q53HC0 331 aaPredicted RBP14.85□□□□□ -0.03
USP39-208ENST00000455732 MBNL2Q5VZF2 373 aaKnown RBP14.85□□□□□ -0.03
USP39-208ENST00000455732 OTPQ5XKR4 325 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 SHQ1Q6PI26 577 aaKnown RBP14.85□□□□□ -0.03
USP39-208ENST00000455732 ARL9Q6T311 187 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 RFPL4BQ6ZWI9 263 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 HS3ST5Q8IZT8 346 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 ZCCHC24Q8N2G6 241 aaKnown RBP14.85□□□□□ -0.03
USP39-208ENST00000455732 CYB561A3Q8NBI2 242 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 GJC3Q8NFK1 279 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 OR1F12Q8NHA8 337 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 DNAJC9Q8WXX5 260 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 MARS2Q96GW9 593 aaKnown RBP14.85□□□□□ -0.03
USP39-208ENST00000455732 C4orf45Q96LM5 186 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 NMNAT2Q9BZQ4 307 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 HDHD2Q9H0R4 259 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 ZNF556Q9HAH1 456 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 CMC2Q9NRP2 79 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 TBCCD1Q9NVR7 557 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 GPR160Q9UJ42 338 aa14.85□□□□□ -0.03
USP39-208ENST00000455732 LOC390937A0A1W2PQ73 354 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 VWC2LB2RUY7 222 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 J3QW42 95 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 RER1O15258 196 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 CD5LO43866 347 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 TIPRLO75663 272 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 ABHD16AO95870 558 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 CLPTM1O96005 669 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 IGHV3-13P01766 116 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 TUBG1P23258 451 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 GRK5P34947 590 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 GGT2P36268 569 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 ARHGDIAP52565 204 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 CCNIQ14094 377 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 CRMP1Q14194 572 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 MAD2L1BPQ15013 274 aaPredicted RBP14.84□□□□□ -0.03
USP39-208ENST00000455732 ATP6AP1Q15904 470 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 MOGQ16653 247 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 ZNF718Q3SXZ3 478 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 SLC18B1Q6NT16 456 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 PROKR2Q8NFJ6 384 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 ABHD4Q8TB40 342 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 IPCEF1Q8WWN9 437 aaPredicted RBP14.84□□□□□ -0.03
USP39-208ENST00000455732 DCLRE1CQ96SD1 692 aaKnown RBP14.84□□□□□ -0.03
USP39-208ENST00000455732 COQ7Q99807 217 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 TUBG2Q9NRH3 451 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 MRPL22Q9NWU5 206 aaKnown RBP14.84□□□□□ -0.03
USP39-208ENST00000455732 TAAR3PQ9P1P4 343 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 CYB5R1Q9UHQ9 305 aa14.84□□□□□ -0.03
USP39-208ENST00000455732 RIIAD1A6NNX1 92 aa14.83□□□□□ -0.04
USP39-208ENST00000455732 H3BN98 237 aa14.83□□□□□ -0.04
USP39-208ENST00000455732 OSMP13725 252 aa14.83□□□□□ -0.04
USP39-208ENST00000455732 ZNF3P17036 446 aa14.83□□□□□ -0.04
USP39-208ENST00000455732 PPP1CBP62140 327 aa14.83□□□□□ -0.04
USP39-208ENST00000455732 PPP2R2BQ00005 443 aa14.83□□□□□ -0.04
USP39-208ENST00000455732 DBPQ10586 325 aaPredicted RBP14.83□□□□□ -0.04
USP39-208ENST00000455732 NKPD1Q17RQ9 610 aa14.83□□□□□ -0.04
USP39-208ENST00000455732 ELFN2Q5R3F8 820 aa14.83□□□□□ -0.04
USP39-208ENST00000455732 SLC27A4Q6P1M0 643 aa14.83□□□□□ -0.04
USP39-208ENST00000455732 CCDC121Q6ZUS5 278 aa14.83□□□□□ -0.04
USP39-208ENST00000455732 ICA1LQ8NDH6 482 aa14.83□□□□□ -0.04
USP39-208ENST00000455732 SLC25A40Q8TBP6 338 aa14.83□□□□□ -0.04
USP39-208ENST00000455732 KLF14Q8TD94 323 aaPredicted RBP14.83□□□□□ -0.04
USP39-208ENST00000455732 TPK1Q9H3S4 243 aa14.83□□□□□ -0.04
USP39-208ENST00000455732 TLX2O43763 284 aaPredicted RBP14.82□□□□□ -0.04
USP39-208ENST00000455732 CIB2O75838 187 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 NGFP01138 241 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 HLA-DQA2P01906 255 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 FCGR1AP12314 374 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 DAOP14920 347 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 GCH1P30793 250 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 PYCR1P32322 319 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 TMEM249Q2WGJ8 235 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 KRTAP27-1Q3LI81 207 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 SPATA46Q5T0L3 261 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 FAHD1Q6P587 224 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.82□□□□□ -0.04
USP39-208ENST00000455732 ZNF786Q8N393 782 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 IQCF1Q8N6M8 205 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 ATG16L2Q8NAA4 619 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 OR5K1Q8NHB7 308 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 SNX33Q8WV41 574 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 COG8Q96MW5 612 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 PIMREGQ9BSJ6 248 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 OR2J1Q9GZK6 312 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 HINT3Q9NQE9 182 aaKnown RBP14.82□□□□□ -0.04
USP39-208ENST00000455732 CGGBP1Q9UFW8 167 aaPredicted RBP14.82□□□□□ -0.04
USP39-208ENST00000455732 AP4S1Q9Y587 144 aa14.82□□□□□ -0.04
USP39-208ENST00000455732 C17orf100A8MU93 164 aa14.81□□□□□ -0.04
USP39-208ENST00000455732 NAT2P11245 290 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms