RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 EML2O95834 649 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 RAB6AP20340 208 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 IGFALSP35858 605 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 NNATQ16517 81 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 OR10K2Q6IF99 312 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 NPSR1Q6W5P4 371 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 MRPL43Q8N983 215 aaKnown RBP12.33□□□□□ -0.44
PTPRE-204ENST00000455661 CHST4Q8NCG5 386 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 ADAD2Q8NCV1 583 aaKnown RBP12.33□□□□□ -0.44
PTPRE-204ENST00000455661 PPP1R14AQ96A00 147 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 VWCEQ96DN2 955 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 C14orf79Q96F83 325 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 DHCR7Q9UBM7 475 aaKnown RBP12.33□□□□□ -0.44
PTPRE-204ENST00000455661 DBX1A6NMT0 343 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 ADH1BP00325 375 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 PNPP00491 289 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 CBR1P16152 277 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 C5AR1P21730 350 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 S100PP25815 95 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 WASP42768 502 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 SLC6A9P48067 706 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 LSSP48449 732 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 RIDAP52758 137 aaKnown RBP12.33□□□□□ -0.44
PTPRE-204ENST00000455661 SPOCK1Q08629 439 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 EIF2B1Q14232 305 aaKnown RBP12.33□□□□□ -0.44
PTPRE-204ENST00000455661 RBM39Q14498 530 aaKnown RBP12.33□□□□□ -0.44
PTPRE-204ENST00000455661 RNF212Q495C1 297 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 RBMS3Q6XE24 437 aaKnown RBP12.33□□□□□ -0.44
PTPRE-204ENST00000455661 ZNF561Q8N587 486 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 BCORP1Q8N888 145 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 ZSCAN4Q8NAM6 433 aaPredicted RBP12.33□□□□□ -0.44
PTPRE-204ENST00000455661 OR13C3Q8NGS6 347 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 FAM3CQ92520 227 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 MRGPRFQ96AM1 343 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 SMIM8Q96KF7 97 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 FGF22Q9HCT0 170 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 RAB22AQ9UL26 194 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 DTX4Q9Y2E6 619 aa12.33□□□□□ -0.44
PTPRE-204ENST00000455661 PRSS38A1L453 326 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 YKT6O15498 198 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 SSX5O60225 188 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 EIF1BO60739 113 aaKnown RBP12.32□□□□□ -0.44
PTPRE-204ENST00000455661 KAT7O95251 611 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 SPARCP09486 303 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 HNRNPA1P09651 372 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTPRE-204ENST00000455661 CD37P11049 281 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 HPGDP15428 266 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 EIF1P41567 113 aaKnown RBP12.32□□□□□ -0.44
PTPRE-204ENST00000455661 SGCAQ16586 387 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 ZNF260Q3ZCT1 412 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 AKIRIN2Q53H80 203 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 OR52W1Q6IF63 320 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 PSRC1Q6PGN9 363 aaPredicted RBP12.32□□□□□ -0.44
PTPRE-204ENST00000455661 GATSQ8NAP1 163 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 ADAMTS17Q8TE56 1095 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 FAM46BQ96A09 425 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 RRNAD1Q96FB5 475 aaKnown RBP12.32□□□□□ -0.44
PTPRE-204ENST00000455661 EGLN1Q9GZT9 426 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 OR51M1Q9H341 326 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 OR2S2Q9NQN1 319 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 GDE1Q9NZC3 331 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 GDF2Q9UK05 429 aaPredicted RBP12.32□□□□□ -0.44
PTPRE-204ENST00000455661 NOSIPQ9Y314 301 aaKnown RBP12.32□□□□□ -0.44
PTPRE-204ENST00000455661 A0A1W2PQU0 124 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 MBTPS2O43462 519 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 ICOSLGO75144 302 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 HRH1P35367 487 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 PDGFRLQ15198 375 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 C1orf100Q5SVJ3 147 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 CATSPERDQ86XM0 798 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 CSNK1A1LQ8N752 337 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 GVQW1Q8N7I0 195 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 SCARF2Q96GP6 870 aaPredicted RBP12.32□□□□□ -0.44
PTPRE-204ENST00000455661 SULT4A1Q9BR01 284 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 HHLA2Q9UM44 414 aa12.32□□□□□ -0.44
PTPRE-204ENST00000455661 HRKO00198 91 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 MFNGO00587 321 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 TBPP20226 339 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 PPT1P50897 306 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 HTRA3P83110 453 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 ROM1Q03395 351 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 MFGE8Q08431 387 aaPredicted RBP12.31□□□□□ -0.44
PTPRE-204ENST00000455661 ELAVL1Q15717 326 aaKnown RBP12.31□□□□□ -0.44
PTPRE-204ENST00000455661 PRSS54Q6PEW0 395 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 RD3Q7Z3Z2 195 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 NKAIN3Q8N8D7 197 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 OR51A2Q8NGJ7 313 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 SLC39A7Q92504 469 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 TRIM43Q96BQ3 446 aaPredicted RBP12.31□□□□□ -0.44
PTPRE-204ENST00000455661 B9D1Q9UPM9 204 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 PCDHGA1Q9Y5H4 931 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 FOXS1O43638 330 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 MED6O75586 246 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 CT45A8P0DMV1 189 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 CT45A9P0DMV2 189 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 F2RL1P55085 397 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 EGR4Q05215 589 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 HMGN3Q15651 99 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 CT45A2Q5DJT8 189 aa12.31□□□□□ -0.44
PTPRE-204ENST00000455661 OTPQ5XKR4 325 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms