RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 MDFIQ99750 246 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 NARFLQ9H6Q4 476 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 MAGIXQ9H6Y5 334 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 SRA1Q9HD15 236 aaKnown RBP18.08■□□□□ 0.48
HMGB3-205ENST00000455596 TUBG2Q9NRH3 451 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 B9D1Q9UPM9 204 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 GRIP1Q9Y3R0 1128 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 TCRBV5S2A0A599 114 aa18.07■□□□□ 0.48
HMGB3-205ENST00000455596 DCTN6O00399 190 aa18.07■□□□□ 0.48
HMGB3-205ENST00000455596 SPRY3O43610 288 aa18.07■□□□□ 0.48
HMGB3-205ENST00000455596 IDH3BO43837 385 aa18.07■□□□□ 0.48
HMGB3-205ENST00000455596 IGHV1-46P01743 117 aa18.07■□□□□ 0.48
HMGB3-205ENST00000455596 MAGEA2P43356 314 aa18.07■□□□□ 0.48
HMGB3-205ENST00000455596 TRIM25Q14258 630 aaKnown RBP18.07■□□□□ 0.48
HMGB3-205ENST00000455596 CCDC92Q53HC0 331 aaPredicted RBP18.07■□□□□ 0.48
HMGB3-205ENST00000455596 RPL13AP3Q6NVV1 102 aa18.07■□□□□ 0.48
HMGB3-205ENST00000455596 USP51Q70EK9 711 aa18.07■□□□□ 0.48
HMGB3-205ENST00000455596 OR6V1Q8N148 313 aa18.07■□□□□ 0.48
HMGB3-205ENST00000455596 OR1F12Q8NHA8 337 aa18.07■□□□□ 0.48
HMGB3-205ENST00000455596 COG8Q96MW5 612 aa18.07■□□□□ 0.48
HMGB3-205ENST00000455596 TRIM15Q9C019 465 aa18.07■□□□□ 0.48
HMGB3-205ENST00000455596 RACGAP1Q9H0H5 632 aa18.07■□□□□ 0.48
HMGB3-205ENST00000455596 ATPIF1Q9UII2 106 aa18.07■□□□□ 0.48
HMGB3-205ENST00000455596 PRPF19Q9UMS4 504 aaKnown RBP18.07■□□□□ 0.48
HMGB3-205ENST00000455596 IGLV1-36A0A0B4J1U3 117 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 RER1O15258 196 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 TIMM8AO60220 97 aaPredicted RBP18.06■□□□□ 0.48
HMGB3-205ENST00000455596 GPANK1O95872 356 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 TFP02787 698 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 T-ENOLP0DO92 83 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 GAAP10253 952 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 SRD5A1P18405 259 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 MEP1BQ16820 701 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 ZMAT1Q5H9K5 638 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 IL17RELQ6ZVW7 336 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.06■□□□□ 0.48
HMGB3-205ENST00000455596 GJC3Q8NFK1 279 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 OR9Q2Q8NGE9 314 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 OR52L1Q8NGH7 329 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 POP5Q969H6 163 aaKnown RBP18.06■□□□□ 0.48
HMGB3-205ENST00000455596 ELMOD3Q96FG2 381 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 DIRC2Q96SL1 478 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 RPRD1BQ9NQG5 326 aaKnown RBP18.06■□□□□ 0.48
HMGB3-205ENST00000455596 ZDHHC8Q9ULC8 765 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 DYSFO75923 2080 aa18.06■□□□□ 0.48
HMGB3-205ENST00000455596 OR6C6A6NF89 314 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 ZSCAN5BA6NJL1 495 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 B4DSR2 109 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 CCNB2O95067 398 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 ADH4P08319 380 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 MS4A2Q01362 244 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 PSG7Q13046 419 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 CR1LQ2VPA4 569 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 HFEQ30201 348 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 FAM98BQ52LJ0 330 aaKnown RBP18.05■□□□□ 0.48
HMGB3-205ENST00000455596 SDR9C7Q8NEX9 313 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 OR4C15Q8NGM1 316 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 SLC7A6Q92536 515 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 DCLRE1CQ96SD1 692 aaKnown RBP18.05■□□□□ 0.48
HMGB3-205ENST00000455596 BTBD10Q9BSF8 475 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 EGLN1Q9GZT9 426 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 C1orf21Q9H246 121 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 POFUT1Q9H488 388 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 EGLN3Q9H6Z9 239 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 KLHL21Q9UJP4 597 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 CDH10Q9Y6N8 788 aa18.05■□□□□ 0.48
HMGB3-205ENST00000455596 CLDN25C9JDP6 229 aa18.04■□□□□ 0.48
HMGB3-205ENST00000455596 J3QW42 95 aa18.04■□□□□ 0.48
HMGB3-205ENST00000455596 WNT9BO14905 357 aa18.04■□□□□ 0.48
HMGB3-205ENST00000455596 DVL1P1P54792 670 aaPredicted RBP18.04■□□□□ 0.48
HMGB3-205ENST00000455596 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.04■□□□□ 0.48
HMGB3-205ENST00000455596 SLC35F1Q5T1Q4 408 aa18.04■□□□□ 0.48
HMGB3-205ENST00000455596 ZBTB46Q86UZ6 589 aa18.04■□□□□ 0.48
HMGB3-205ENST00000455596 SLC26A10Q8NG04 563 aa18.04■□□□□ 0.48
HMGB3-205ENST00000455596 OR52E2Q8NGJ4 325 aa18.04■□□□□ 0.48
HMGB3-205ENST00000455596 ASB9Q96DX5 294 aa18.04■□□□□ 0.48
HMGB3-205ENST00000455596 LRGUKQ96M69 825 aa18.04■□□□□ 0.48
HMGB3-205ENST00000455596 HDHD2Q9H0R4 259 aa18.04■□□□□ 0.48
HMGB3-205ENST00000455596 FN3KQ9H479 309 aa18.04■□□□□ 0.48
HMGB3-205ENST00000455596 MSL2Q9HCI7 577 aa18.04■□□□□ 0.48
HMGB3-205ENST00000455596 PURGQ9UJV8 347 aaKnown RBP18.04■□□□□ 0.48
HMGB3-205ENST00000455596 STARD10Q9Y365 291 aa18.04■□□□□ 0.48
HMGB3-205ENST00000455596 LHFPL6Q9Y693 200 aa18.04■□□□□ 0.48
HMGB3-205ENST00000455596 OR6C68A6NDL8 312 aa18.03■□□□□ 0.48
HMGB3-205ENST00000455596 GASTP01350 101 aa18.03■□□□□ 0.48
HMGB3-205ENST00000455596 DBHP09172 617 aa18.03■□□□□ 0.48
HMGB3-205ENST00000455596 KITLGP21583 273 aa18.03■□□□□ 0.48
HMGB3-205ENST00000455596 RGS6P49758 472 aa18.03■□□□□ 0.48
HMGB3-205ENST00000455596 HIST1H3AP68431 136 aa18.03■□□□□ 0.48
HMGB3-205ENST00000455596 MVKQ03426 396 aa18.03■□□□□ 0.48
HMGB3-205ENST00000455596 COX10Q12887 443 aa18.03■□□□□ 0.48
HMGB3-205ENST00000455596 SLC36A3Q495N2 470 aa18.03■□□□□ 0.48
HMGB3-205ENST00000455596 CLEC12AQ5QGZ9 265 aa18.03■□□□□ 0.48
HMGB3-205ENST00000455596 HIST2H3PS2Q5TEC6 136 aa18.03■□□□□ 0.48
HMGB3-205ENST00000455596 OR2T5Q6IEZ7 315 aa18.03■□□□□ 0.48
HMGB3-205ENST00000455596 ZNF770Q6IQ21 691 aaPredicted RBP18.03■□□□□ 0.48
HMGB3-205ENST00000455596 HIST2H3AQ71DI3 136 aa18.03■□□□□ 0.48
HMGB3-205ENST00000455596 CXXC5Q7LFL8 322 aaKnown RBP18.03■□□□□ 0.48
HMGB3-205ENST00000455596 OR2T29Q8NH02 315 aa18.03■□□□□ 0.48
HMGB3-205ENST00000455596 CMBLQ96DG6 245 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms