RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 C16orf62Q7Z3J2 963 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 NET1Q7Z628 596 aaPredicted RBP3.04□□□□□ -1.92
RBM39-220ENST00000455343 HMGN2P46Q86SG4 172 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 ZNF440Q8IYI8 595 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 CLECL1Q8IZS7 167 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 CLEC4FQ8N1N0 589 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 KRTCAP2Q8N6L1 136 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 CCNYL1Q8N7R7 359 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 NOA1Q8NC60 698 aaKnown RBP3.04□□□□□ -1.92
RBM39-220ENST00000455343 ADPRHL1Q8NDY3 354 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 SLC30A7Q8NEW0 376 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 OR8J2Q8NGG1 315 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 PNPT1Q8TCS8 783 aaKnown RBP3.04□□□□□ -1.92
RBM39-220ENST00000455343 MGARPQ8TDB4 240 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 ACMSDQ8TDX5 336 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 SSMEM1Q8WWF3 244 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 GEMIN6Q8WXD5 167 aaKnown RBP3.04□□□□□ -1.92
RBM39-220ENST00000455343 SLC35G5Q96KT7 338 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 TRNT1Q96Q11 434 aaKnown RBP3.04□□□□□ -1.92
RBM39-220ENST00000455343 PRPF18Q99633 342 aaKnown RBP3.04□□□□□ -1.92
RBM39-220ENST00000455343 EMC6Q9BV81 110 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 MTHFD2LQ9H903 347 aaPredicted RBP3.04□□□□□ -1.92
RBM39-220ENST00000455343 TMEM106BQ9NUM4 274 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 LRCH1Q9Y2L9 728 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 UTP11Q9Y3A2 253 aaKnown RBP3.04□□□□□ -1.92
RBM39-220ENST00000455343 NOTCH3Q9UM47 2321 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 WNK2Q9Y3S1 2297 aa3.04□□□□□ -1.92
RBM39-220ENST00000455343 HUWE1Q7Z6Z7 4374 aaKnown RBP3.04□□□□□ -1.92
RBM39-220ENST00000455343 HERC2O95714 4834 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 IGKV1D-42A0A075B6H8 117 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 A0A087WUJ7 227 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 CENPVL3A0A0U1RRI6 287 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 PRSS51A0A1B0GVH4 220 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 K7EIL1 84 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 AIM2O14862 343 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 CFLARO15519 480 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 TPD52L2O43399 206 aaKnown RBP3.03□□□□□ -1.92
RBM39-220ENST00000455343 SPRY3O43610 288 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 OR2T1O43869 369 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 XPNPEP2O43895 674 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 PIP5K1CO60331 668 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 PEX11AO75192 247 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 CRCPO75575 148 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 AHSA1O95433 338 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 PPP1R3DO95685 299 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 HPRP00739 348 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 IGHV4-59P01825 116 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 C1QCP02747 245 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 LCKP06239 509 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 DBIP07108 87 aaKnown RBP3.03□□□□□ -1.92
RBM39-220ENST00000455343 MMP7P09237 267 aaPredicted RBP3.03□□□□□ -1.92
RBM39-220ENST00000455343 GKN3PP0CG01 181 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 PRG2P13727 222 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 MMP9P14780 707 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 UQCRBP14927 111 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 IL7RP16871 459 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 UQCRC2P22695 453 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 PRKAR1BP31321 381 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 MPV17P39210 176 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 RPS5P46782 204 aaKnown RBP3.03□□□□□ -1.92
RBM39-220ENST00000455343 CLDN8P56748 225 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 TIRAPP58753 221 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 NANOS2P60321 138 aaKnown RBP3.03□□□□□ -1.92
RBM39-220ENST00000455343 GNA13Q14344 377 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 ZMYND11Q15326 602 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 SYPL1Q16563 259 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 GALNTL6Q49A17 601 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 ESCO2Q56NI9 601 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 C6orf136Q5SQH8 315 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 FAM69AQ5T7M9 428 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 ATAD3BQ5T9A4 648 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 GPR157Q5UAW9 335 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 IL23RQ5VWK5 629 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 OR4F3Q6IEY1 312 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 TNFAIP8L2Q6P589 184 aaPredicted RBP3.03□□□□□ -1.92
RBM39-220ENST00000455343 BTNL3Q6UXE8 466 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 ZNF841Q6ZN19 808 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 C9orf47Q6ZRZ4 202 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 ZCCHC23Q6ZST2 131 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 PXKQ7Z7A4 578 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 DPPA2Q7Z7J5 298 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 SNX32Q86XE0 403 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 UEVLDQ8IX04 471 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 C1orf174Q8IYL3 243 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 ZNF101Q8IZC7 436 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 CLIP4Q8N3C7 705 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 SLC22A24Q8N4F4 322 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 ANKFN1Q8N957 763 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 WFDC9Q8NEX5 89 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 OR1J1Q8NGS3 322 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 OR6S1Q8NH40 331 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 PPP1R35Q8TAP8 253 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 KLF14Q8TD94 323 aaPredicted RBP3.03□□□□□ -1.92
RBM39-220ENST00000455343 IPCEF1Q8WWN9 437 aaPredicted RBP3.03□□□□□ -1.92
RBM39-220ENST00000455343 TAAR8Q969N4 342 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 PHF21AQ96BD5 680 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 SLC25A36Q96CQ1 311 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 SLC47A1Q96FL8 570 aa3.03□□□□□ -1.92
RBM39-220ENST00000455343 THOC1Q96FV9 657 aaKnown RBP3.03□□□□□ -1.92
RBM39-220ENST00000455343 TXNDC15Q96J42 360 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms