RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 NUDCD2Q8WVJ2 157 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 RAB40AQ8WXH6 277 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 SLAMF6Q96DU3 332 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 OR2M2Q96R28 347 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 KCNJ15Q99712 375 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 NMNAT2Q9BZQ4 307 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 ADAM19Q9H013 955 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 CHRDQ9H2X0 955 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 SLA2Q9H6Q3 261 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 RANBP3Q9H6Z4 567 aaPredicted RBP10.73□□□□□ -0.69
SMPD4-213ENST00000454468 CHST11Q9NPF2 352 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 HPF1Q9NWY4 346 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 ALKBH4Q9NXW9 302 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 COPZ2Q9P299 210 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 MYOTQ9UBF9 498 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 WNT16Q9UBV4 365 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 SPTA1P02549 2419 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 ICE1Q9Y2F5 2266 aa10.73□□□□□ -0.69
SMPD4-213ENST00000454468 METTL21EPA6NDL7 271 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 CCSO14618 274 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 PHYHO14832 338 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 TLX3O43711 291 aaPredicted RBP10.72□□□□□ -0.69
SMPD4-213ENST00000454468 DPP4P27487 766 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 EPHA8P29322 1005 aaPredicted RBP10.72□□□□□ -0.69
SMPD4-213ENST00000454468 OR1J4Q8NGS1 313 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 OR10K1Q8NGX5 313 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 PGAM5Q96HS1 289 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 NARS2Q96I59 477 aaKnown RBP10.72□□□□□ -0.69
SMPD4-213ENST00000454468 GFI1Q99684 422 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 SLC5A6Q9Y289 635 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 ZNF432O94892 652 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 QDPRP09417 244 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 PTBP1P26599 531 aaKnown RBP eCLIP10.72□□□□□ -0.697e-7■■■■□ 19.6
SMPD4-213ENST00000454468 SNU13P55769 128 aaKnown RBP10.72□□□□□ -0.69
SMPD4-213ENST00000454468 CXADRP78310 365 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 GSG1Q2KHT4 349 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 EMC4Q5J8M3 183 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 NKAPLQ5M9Q1 402 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 CLVS2Q5SYC1 327 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 ALKBH2Q6NS38 261 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 IDO2Q6ZQW0 420 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 SLC51BQ86UW2 128 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 OR14L1PQ8NHC6 308 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 MAFIPQ8WZ33 124 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 MIB2Q96AX9 1013 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 HAVCR1Q96D42 359 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 SLC39A1Q9NY26 324 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 PISDQ9UG56 409 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 IGKV3D-11A0A0A0MRZ8 115 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 NUPL2O15504 423 aaKnown RBP10.72□□□□□ -0.69
SMPD4-213ENST00000454468 MFAP5Q13361 173 aa10.72□□□□□ -0.69
SMPD4-213ENST00000454468 TPRP12270 2363 aaKnown RBP10.72□□□□□ -0.69
SMPD4-213ENST00000454468 NSG1A0A0A6YYJ2 146 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 GGT3PA6NGU5 568 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 RAMP1O60894 148 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 SLC22A5O76082 557 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 SPINK2P20155 84 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 EXOSC6Q5RKV6 272 aaKnown RBP10.71□□□□□ -0.69
SMPD4-213ENST00000454468 METTL11BQ5VVY1 283 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 OR52W1Q6IF63 320 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 ALKAL2Q6UX46 152 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 BAIAP2L2Q6UXY1 529 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 TRILQ7L0X0 811 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 SLC43A2Q8N370 569 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 APCDD1LQ8NCL9 501 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 OR11H4Q8NGC9 324 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 ASB17Q8WXJ9 295 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 ST8SIA2Q92186 375 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 UBL7Q96S82 380 aaPredicted RBP10.71□□□□□ -0.69
SMPD4-213ENST00000454468 SOSTQ9BQB4 213 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 TINAGL1Q9GZM7 467 aaPredicted RBP10.71□□□□□ -0.69
SMPD4-213ENST00000454468 ACTR6Q9GZN1 396 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 C1orf198Q9H425 327 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 EXOSC3Q9NQT5 275 aaKnown RBP10.71□□□□□ -0.69
SMPD4-213ENST00000454468 FBXO4Q9UKT5 387 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 C5orf51A6NDU8 294 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 A6NIZ1 184 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 CRTAPO75718 401 aaPredicted RBP10.71□□□□□ -0.69
SMPD4-213ENST00000454468 RGS11O94810 467 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 IGHG1P01857 330 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 ZNF35P13682 527 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 RAP1BP61224 184 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 RAP1AP62834 184 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 EGR3Q06889 387 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 GGTLC2Q14390 218 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 DEFB123Q8N688 67 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 ZSCAN1Q8NBB4 408 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 AGBL5Q8NDL9 886 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 PLEK2Q9NYT0 353 aa10.71□□□□□ -0.69
SMPD4-213ENST00000454468 ZNF736B4DX44 427 aaPredicted RBP10.71□□□□□ -0.7
SMPD4-213ENST00000454468 EEF1E1-BLOC1S5C9J1V9 151 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 SPDEFO95238 335 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 HTR3BO95264 441 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 TRAPPC2P0DI81 140 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 TRAPPC2BP0DI82 140 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 PI3P19957 117 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 STARP49675 285 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 BTG1P62324 171 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 PMPCAQ10713 525 aa10.71□□□□□ -0.7
SMPD4-213ENST00000454468 STEAP1BQ6NZ63 245 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms