RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 GMPR2Q9P2T1 348 aaKnown RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 SLC22A13Q9Y226 551 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 B3GALT5Q9Y2C3 310 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 GOLT1BQ9Y3E0 138 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 LSM4Q9Y4Z0 139 aaKnown RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 COLEC10Q9Y6Z7 277 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 MDC1Q14676 2089 aaKnown RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 CLIC1O00299 241 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 CASKO14936 926 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 AKR1D1P51857 326 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 MLLT10P55197 1068 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 PCBP3P57721 371 aaKnown RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 ZP1P60852 638 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 FAM3AP98173 230 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 HSPB3Q12988 150 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 KIR2DS3Q14952 304 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 RPE65Q16518 533 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 ZNF630Q2M218 657 aaPredicted RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 POM121L1PQ3SYA9 428 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 UBE2UQ5VVX9 321 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 SAXO2Q658L1 398 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 CYP2R1Q6VVX0 501 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 RBMS3Q6XE24 437 aaKnown RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 GCNT7Q6ZNI0 430 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 NUFIP2Q7Z417 695 aaKnown RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 P4HA3Q7Z4N8 544 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 TMEM144Q7Z5S9 345 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 CALHM1Q8IU99 346 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 LINC01555Q8NAE3 123 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 OR2A1Q8NGT9 310 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 FLVCR1-AS1Q8TAF5 88 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 MOAP1Q96BY2 351 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 MS4A10Q96PG2 267 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 ZNF426Q9BUY5 554 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 A4GALTQ9NPC4 353 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 SLC22A11Q9NSA0 550 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 ING3Q9NXR8 418 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 NTMQ9P121 344 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 PRELID3BQ9Y3B1 194 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 NCOR1O75376 2440 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 ELOA3CA0A087WX78 387 aaPredicted RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 ELOA3DA6NLF2 546 aaPredicted RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 SOCS2O14508 198 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 TM4SF5O14894 197 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 PPP1R2P9O14990 202 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 NARSO43776 548 aaKnown RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 SRPX2O60687 465 aaPredicted RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 AGFG2O95081 481 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 ALPLP05186 524 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 LAMP1P11279 417 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 IL9P15248 144 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 MAPK12P53778 367 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 CLDN12P56749 244 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 EXOSC2Q13868 293 aaKnown RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 Q8N402 240 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 MFSD4AQ8N468 514 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 ST6GALNAC3Q8NDV1 305 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 OR10A6Q8NH74 314 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 FAM3CQ92520 227 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 TM4SF18Q96CE8 201 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 NEURL3Q96EH8 262 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 HBEGFQ99075 208 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 GPR35Q9HC97 309 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 LHX9Q9NQ69 397 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 LYARQ9NX58 379 aaKnown RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 IL17BQ9UHF5 180 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 FBXO4Q9UKT5 387 aa6.94□□□□□ -1.3
BRCC3-208ENST00000453705 COA3Q9Y2R0 106 aaPredicted RBP6.94□□□□□ -1.3
BRCC3-208ENST00000453705 NUP210LQ5VU65 1888 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 hCG_38984A0A1B0GV85 526 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 PLPP1O14494 284 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 XRCC3O43542 346 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 LDOC1O95751 146 aaPredicted RBP6.93□□□□□ -1.3
BRCC3-208ENST00000453705 CBX7O95931 251 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 IDH3GP51553 393 aaPredicted RBP6.93□□□□□ -1.3
BRCC3-208ENST00000453705 PLP1P60201 277 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 GABARAPL2P60520 117 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 CXADRP78310 365 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 BLOC1S1P78537 153 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 MRPS11P82912 194 aaKnown RBP6.93□□□□□ -1.3
BRCC3-208ENST00000453705 RGNQ15493 299 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 ACKR1Q16570 336 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 ZNF385BQ569K4 471 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 FCRLAQ7L513 359 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 OR7A2PQ8NGA2 310 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 OR5AN1Q8NGI8 311 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 BAALCQ8WXS3 180 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 GGHQ92820 318 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 EPYCQ99645 322 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 WDR77Q9BQA1 342 aaPredicted RBP6.93□□□□□ -1.3
BRCC3-208ENST00000453705 MRI1Q9BV20 369 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 MMP28Q9H239 520 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 TPT1P8Q9HAU6 139 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 DUSP22Q9NRW4 184 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 C14orf166Q9Y224 244 aaKnown RBP6.93□□□□□ -1.3
BRCC3-208ENST00000453705 TMED7Q9Y3B3 224 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 SNRNP200O75643 2136 aaKnown RBP6.93□□□□□ -1.3
BRCC3-208ENST00000453705 WDFY4Q6ZS81 3184 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 EML5Q05BV3 1969 aa6.93□□□□□ -1.3
BRCC3-208ENST00000453705 IGKV1-8A0A0C4DH67 115 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms