RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 PRKCDQ05655 676 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 TRAM2Q15035 370 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 ZMYND11Q15326 602 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 KLF17Q5JT82 389 aaPredicted RBP9.16□□□□□ -0.94
USP1-204ENST00000452143 C9orf139Q6ZV77 190 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 IGFN1Q86VF2 1251 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 NRMQ8IXM6 262 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 RNF113BQ8IZP6 322 aaKnown RBP9.16□□□□□ -0.94
USP1-204ENST00000452143 PCYOX1LQ8NBM8 494 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 OR2T12Q8NG77 320 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 OR51A7Q8NH64 312 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 C10orf82Q8WW14 230 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 SLC25A28Q96A46 364 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 TPD52L3Q96J77 140 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 C1orf147Q96MC9 270 aaPredicted RBP9.16□□□□□ -0.94
USP1-204ENST00000452143 ZNF583Q96ND8 569 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 OR2V2Q96R30 315 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 GRHPRQ9UBQ7 328 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 ZNF69Q9UC07 566 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 EGFL7Q9UHF1 273 aa9.16□□□□□ -0.94
USP1-204ENST00000452143 TEX13CA0A0J9YWL9 993 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 POM121CA8CG34 1229 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 EFCAB9A8MZ26 197 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 XKRYO14609 159 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 FSTL3O95633 263 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 IFNW1P05000 195 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 RAC2P15153 192 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 MTNR1AP48039 350 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 RGS6P49758 472 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 MMP16P51512 607 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 SEC61A1P61619 476 aaKnown RBP9.15□□□□□ -0.94
USP1-204ENST00000452143 BAMBIQ13145 260 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 FHL1Q13642 323 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 SLC27A4Q6P1M0 643 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 Q6ZR03 302 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 VASH1Q7L8A9 365 aaPredicted RBP9.15□□□□□ -0.94
USP1-204ENST00000452143 PARP8Q8N3A8 854 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 OR13C2Q8NGS9 318 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 ACOT11Q8WXI4 607 aaPredicted RBP9.15□□□□□ -0.94
USP1-204ENST00000452143 HAVCR1Q96D42 359 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 TMEM120AQ9BXJ8 343 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 EMC7Q9NPA0 242 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 GID8Q9NWU2 228 aa9.15□□□□□ -0.94
USP1-204ENST00000452143 ELOVL7A1L3X0 281 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 PRSS37A4D1T9 235 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 OR6C6A6NF89 314 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 CEACAM18A8MTB9 384 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 TMEM178BH3BS89 294 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 H7C1C5 153 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 KCNAB3O43448 404 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 CD14P08571 375 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 RPS2P15880 293 aaKnown RBP9.14□□□□□ -0.95
USP1-204ENST00000452143 RPL4P36578 427 aaKnown RBP9.14□□□□□ -0.95
USP1-204ENST00000452143 LSM6P62312 80 aaKnown RBP9.14□□□□□ -0.95
USP1-204ENST00000452143 LCN6P62502 163 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 PAX8Q06710 450 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 MESTQ5EB52 335 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 BTNL3Q6UXE8 466 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 LRRN1Q6UXK5 716 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 FBXW12Q6X9E4 464 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 ZNF730Q6ZMV8 503 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 TMPRSS11FQ6ZWK6 438 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 MBOAT2Q6ZWT7 520 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 FAM122BQ7Z309 247 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 ARPINQ7Z6K5 226 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 MICU2Q8IYU8 434 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 OR5L1Q8NGL2 311 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 ITLN1Q8WWA0 313 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 PTP4A1Q93096 173 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 UPRTQ96BW1 309 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 RASD2Q96D21 266 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 CMBLQ96DG6 245 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 ZNF48Q96MX3 618 aaPredicted RBP9.14□□□□□ -0.95
USP1-204ENST00000452143 ZNF570Q96NI8 536 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 FNDC11Q9BVV2 318 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 SSBP3Q9BWW4 388 aaPredicted RBP9.14□□□□□ -0.95
USP1-204ENST00000452143 MS4A7Q9GZW8 240 aaPredicted RBP9.14□□□□□ -0.95
USP1-204ENST00000452143 POFUT1Q9H488 388 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 ANKRD19PQ9H560 264 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 UNKLQ9H9P5 680 aaKnown RBP9.14□□□□□ -0.95
USP1-204ENST00000452143 GCM1Q9NP62 436 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 GMPR2Q9P2T1 348 aaKnown RBP9.14□□□□□ -0.95
USP1-204ENST00000452143 ASH2LQ9UBL3 628 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 TMEM5Q9Y2B1 443 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 AP3M1Q9Y2T2 418 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 STARD10Q9Y365 291 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 ADAM18Q9Y3Q7 739 aa9.14□□□□□ -0.95
USP1-204ENST00000452143 A0A087WUU8 490 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 IGHV2-70DA0A0C4DH43 119 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 LRRC30A6NM36 301 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 CDC42EP2O14613 210 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 FFAR1O14842 300 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 PLATP00750 562 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 SCG5P05408 212 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 TROVE2P10155 538 aaKnown RBP eCLIP9.13□□□□□ -0.95
USP1-204ENST00000452143 CTLA4P16410 223 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 SDHAP31040 664 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 SRP9P49458 86 aaKnown RBP9.13□□□□□ -0.95
USP1-204ENST00000452143 PAX2Q02962 417 aa9.13□□□□□ -0.95
USP1-204ENST00000452143 KLF10Q13118 480 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms