RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, human

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-208	ENST00000450385	CPT2	P23786	658 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	CDKN2A	P42771	156 aa	Known RBP	13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	GSS	P48637	474 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	FXYD6P3	P58550	94 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	LMO4	P61968	165 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	LCN6	P62502	163 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	HIST1H3A	P68431	136 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	MXRA7	P84157	204 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	ECH1	Q13011	328 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	CDK5R2	Q13319	367 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	HIST2H3PS2	Q5TEC6	136 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	LIPN	Q5VXI9	398 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	ACSM5	Q6NUN0	579 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	SLC27A4	Q6P1M0	643 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	HIST2H3A	Q71DI3	136 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	ZBTB46	Q86UZ6	589 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	ZDHHC21	Q8IVQ6	265 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	RFLNB	Q8N5W9	214 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	FAM86B1	Q8N7N1	296 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	OR1F12	Q8NHA8	337 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	RASD2	Q96D21	266 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	HAVCR1	Q96D42	359 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	ERMAP	Q96PL5	475 aa	Predicted RBP	13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	SOX7	Q9BT81	388 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	HDHD2	Q9H0R4	259 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	MAGIX	Q9H6Y5	334 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	KCNG2	Q9UJ96	466 aa		13.64	□□□□□ -0.23
SGCE-208	ENST00000450385	COA3	Q9Y2R0	106 aa	Predicted RBP	13.64	□□□□□ -0.23
SGCE-208	ENST00000450385		A0A0A6YYJ9	748 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	RNF212B	A8MTL3	300 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	SOCS2	O14508	198 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	DIRAS1	O95057	198 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	NGF	P01138	241 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	IGHV1-46	P01743	117 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	TNFRSF1A	P19438	455 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	GATA3	P23771	443 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	NOS3	P29474	1203 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	RRM2	P31350	389 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	IL2RG	P31785	369 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	PSG7	Q13046	419 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	ALKBH6	Q3KRA9	238 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	RFPL4B	Q6ZWI9	263 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	USP51	Q70EK9	711 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	JAZF1	Q86VZ6	243 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	FANK1	Q8TC84	345 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	TMEM186	Q96B77	213 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	NSL1	Q96IY1	281 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	SAMD8	Q96LT4	415 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	CCT8L2	Q96SF2	557 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	COQ7	Q99807	217 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	OR52D1	Q9H346	318 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	EMC7	Q9NPA0	242 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	ASH2L	Q9UBL3	628 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	B9D1	Q9UPM9	204 aa		13.63	□□□□□ -0.23
SGCE-208	ENST00000450385	DYSF	O75923	2080 aa		13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	PHF1	O43189	567 aa	Predicted RBP	13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	TIMM8A	O60220	97 aa	Predicted RBP	13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	UBOX5	O94941	541 aa		13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	FAM107A	O95990	144 aa		13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	CALB2	P22676	271 aa		13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	MPV17	P39210	176 aa		13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	MAGEA2	P43356	314 aa		13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	COX10	Q12887	443 aa		13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	TST	Q16762	297 aa	Known RBP	13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	FBXW12	Q6X9E4	464 aa		13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	PTCHD4	Q6ZW05	846 aa		13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	GPA33	Q99795	319 aa		13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	C1orf21	Q9H246	121 aa		13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	IL20	Q9NYY1	176 aa		13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	IL19	Q9UHD0	177 aa		13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	PURG	Q9UJV8	347 aa	Known RBP	13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	WNK2	Q9Y3S1	2297 aa		13.62	□□□□□ -0.23
SGCE-208	ENST00000450385	IGLV1-36	A0A0B4J1U3	117 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385		B2RBV5	119 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385		J3QLI3	93 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	SPRY3	O43610	288 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	CCNI	Q14094	377 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	TRIM25	Q14258	630 aa	Known RBP	13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	CCDC92	Q53HC0	331 aa	Predicted RBP	13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	SPATA46	Q5T0L3	261 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	ZNF620	Q6ZNG0	422 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	FITM2	Q8N6M3	262 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	OR52L1	Q8NGH7	329 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	IFT27	Q9BW83	186 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	CDADC1	Q9BWV3	514 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	ZNF665	Q9H7R5	613 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	HIF1AN	Q9NWT6	349 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	IL20RA	Q9UHF4	553 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	PRPF19	Q9UMS4	504 aa	Known RBP	13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	POLR1D	Q9Y2S0	133 aa		13.61	□□□□□ -0.23
SGCE-208	ENST00000450385	PPIAL4E	A0A075B759	164 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	PPIAL4C	A0A0B4J2A2	164 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	PPIAL4D	F5H284	164 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	CDC14B	O60729	498 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	FSTL3	O95633	263 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	PPIAL4F	P0DN26	164 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	HIST1H1C	P16403	213 aa	Known RBP	13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	SELE	P16581	610 aa		13.6	□□□□□ -0.23
SGCE-208	ENST00000450385	SRP14	P37108	136 aa	Known RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms