RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 TNFRSF1AP19438 455 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 NOS3P29474 1203 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 LIMS1P48059 325 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 LSM6P62312 80 aaKnown RBP18.65■□□□□ 0.58
CPSF7-208ENST00000450000 SAMD4BQ5PRF9 694 aaKnown RBP18.65■□□□□ 0.58
CPSF7-208ENST00000450000 PGM2L1Q6PCE3 622 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 ZNF771Q7L3S4 317 aaPredicted RBP18.65■□□□□ 0.58
CPSF7-208ENST00000450000 VASH1Q7L8A9 365 aaPredicted RBP18.65■□□□□ 0.58
CPSF7-208ENST00000450000 OR4M2Q8NGB6 313 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 OR5L1Q8NGL2 311 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 FANK1Q8TC84 345 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 NSMCE2Q96MF7 247 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 ERMAPQ96PL5 475 aaPredicted RBP18.65■□□□□ 0.58
CPSF7-208ENST00000450000 GPX7Q96SL4 187 aaPredicted RBP18.65■□□□□ 0.58
CPSF7-208ENST00000450000 NUAK2Q9H093 628 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 NDE1Q9NXR1 346 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 PCDHB10Q9UN67 800 aa18.65■□□□□ 0.58
CPSF7-208ENST00000450000 SURF4O15260 269 aa18.64■□□□□ 0.57
CPSF7-208ENST00000450000 ZNF26P17031 533 aaPredicted RBP18.64■□□□□ 0.57
CPSF7-208ENST00000450000 SLC6A6P31641 620 aa18.64■□□□□ 0.57
CPSF7-208ENST00000450000 PSG7Q13046 419 aa18.64■□□□□ 0.57
CPSF7-208ENST00000450000 THSD4Q6ZMP0 1018 aa18.64■□□□□ 0.57
CPSF7-208ENST00000450000 TSEN54Q7Z6J9 526 aaKnown RBP18.64■□□□□ 0.57
CPSF7-208ENST00000450000 OR2Z1Q8NG97 314 aa18.64■□□□□ 0.57
CPSF7-208ENST00000450000 OR1F12Q8NHA8 337 aa18.64■□□□□ 0.57
CPSF7-208ENST00000450000 CMBLQ96DG6 245 aa18.64■□□□□ 0.57
CPSF7-208ENST00000450000 C7orf34Q96L11 122 aa18.64■□□□□ 0.57
CPSF7-208ENST00000450000 VSX1Q9NZR4 365 aaPredicted RBP18.64■□□□□ 0.57
CPSF7-208ENST00000450000 PURGQ9UJV8 347 aaKnown RBP18.64■□□□□ 0.57
CPSF7-208ENST00000450000 PPP1R3DO95685 299 aa18.63■□□□□ 0.57
CPSF7-208ENST00000450000 FABP3P05413 133 aa18.63■□□□□ 0.57
CPSF7-208ENST00000450000 RGS6P49758 472 aa18.63■□□□□ 0.57
CPSF7-208ENST00000450000 SEC23BQ15437 767 aa18.63■□□□□ 0.57
CPSF7-208ENST00000450000 C16orf89Q6UX73 402 aa18.63■□□□□ 0.57
CPSF7-208ENST00000450000 PGAM4Q8N0Y7 254 aa18.63■□□□□ 0.57
CPSF7-208ENST00000450000 FAM86B1Q8N7N1 296 aa18.63■□□□□ 0.57
CPSF7-208ENST00000450000 GJC3Q8NFK1 279 aa18.63■□□□□ 0.57
CPSF7-208ENST00000450000 ZNF418Q8TF45 676 aaPredicted RBP18.63■□□□□ 0.57
CPSF7-208ENST00000450000 PTP4A1Q93096 173 aa18.63■□□□□ 0.57
CPSF7-208ENST00000450000 DCLRE1CQ96SD1 692 aaKnown RBP18.63■□□□□ 0.57
CPSF7-208ENST00000450000 CDRT15Q96T59 188 aa18.63■□□□□ 0.57
CPSF7-208ENST00000450000 IFT27Q9BW83 186 aa18.63■□□□□ 0.57
CPSF7-208ENST00000450000 CDADC1Q9BWV3 514 aa18.63■□□□□ 0.57
CPSF7-208ENST00000450000 TAGLN3Q9UI15 199 aa18.63■□□□□ 0.57
CPSF7-208ENST00000450000 OR6C6A6NF89 314 aa18.62■□□□□ 0.57
CPSF7-208ENST00000450000 PLPP2O43688 288 aa18.62■□□□□ 0.57
CPSF7-208ENST00000450000 UBOX5O94941 541 aa18.62■□□□□ 0.57
CPSF7-208ENST00000450000 IGHV2-5P01817 119 aa18.62■□□□□ 0.57
CPSF7-208ENST00000450000 CD55P08174 381 aa18.62■□□□□ 0.57
CPSF7-208ENST00000450000 ADH4P08319 380 aa18.62■□□□□ 0.57
CPSF7-208ENST00000450000 RFX4Q33E94 735 aa18.62■□□□□ 0.57
CPSF7-208ENST00000450000 DCAF12L2Q5VW00 463 aa18.62■□□□□ 0.57
CPSF7-208ENST00000450000 OTPQ5XKR4 325 aa18.62■□□□□ 0.57
CPSF7-208ENST00000450000 LEG1Q6P5S2 330 aa18.62■□□□□ 0.57
CPSF7-208ENST00000450000 SRA1Q9HD15 236 aaKnown RBP18.62■□□□□ 0.57
CPSF7-208ENST00000450000 KLHL21Q9UJP4 597 aa18.62■□□□□ 0.57
CPSF7-208ENST00000450000 STARD10Q9Y365 291 aa18.62■□□□□ 0.57
CPSF7-208ENST00000450000 A0A0A6YYJ9 748 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 DCTN3O75935 186 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 TXNDC12O95881 172 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 HLA-DQA2P01906 255 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 SBK2P0C263 348 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 HSD17B1P14061 328 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 CDKN2AP42771 156 aaKnown RBP18.61■□□□□ 0.57
CPSF7-208ENST00000450000 GNGT1P63211 74 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 CDK5R2Q13319 367 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 PTCHD4Q6ZW05 846 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 ATG16L2Q8NAA4 619 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 SLC7A6Q92536 515 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 DHRS1Q96LJ7 313 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 OR52D1Q9H346 318 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 ARL2BPQ9Y2Y0 163 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 NPTNQ9Y639 398 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 CUBNO60494 3623 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 MXRA5Q9NR99 2828 aa18.61■□□□□ 0.57
CPSF7-208ENST00000450000 J3QLI3 93 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 J3QW42 95 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 IMPA2O14732 288 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 RER1O15258 196 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 KITLGP21583 273 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 MSX2P35548 267 aaPredicted RBP18.6■□□□□ 0.57
CPSF7-208ENST00000450000 SLC36A3Q495N2 470 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 SLC27A4Q6P1M0 643 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 KLHL36Q8N4N3 616 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 SPICQ8N5J4 248 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 OR2AJ1Q8NGZ0 328 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 GNPDA2Q8TDQ7 276 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 HAVCR1Q96D42 359 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 SAMD8Q96LT4 415 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 HDHD2Q9H0R4 259 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 TMEM106BQ9NUM4 274 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 ATPIF1Q9UII2 106 aa18.6■□□□□ 0.57
CPSF7-208ENST00000450000 ARPC2O15144 300 aa18.59■□□□□ 0.57
CPSF7-208ENST00000450000 RAC2P15153 192 aa18.59■□□□□ 0.57
CPSF7-208ENST00000450000 GATA3P23771 443 aa18.59■□□□□ 0.57
CPSF7-208ENST00000450000 FPR3P25089 353 aa18.59■□□□□ 0.57
CPSF7-208ENST00000450000 RRM2P31350 389 aa18.59■□□□□ 0.57
CPSF7-208ENST00000450000 MNAT1P51948 309 aa18.59■□□□□ 0.57
CPSF7-208ENST00000450000 CCDC92Q53HC0 331 aaPredicted RBP18.59■□□□□ 0.57
CPSF7-208ENST00000450000 TMEM255AQ5JRV8 349 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms