RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 ONECUT1Q9UBC0 465 aa6.36□□□□□ -1.39
LINC01961-201ENST00000449954 BAIAP2L1Q9UHR4 511 aa6.36□□□□□ -1.39
LINC01961-201ENST00000449954 LOC100509620A0A075B734 347 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 A0A087WUJ7 227 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 CDHR4A6H8M9 788 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 TMEM114B3SHH9 223 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 MS4A18H0YCH9 400 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 SYNGR1O43759 233 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 SLC25A17O43808 307 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 HPRP00739 348 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 IGF2P01344 180 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 DBIP07108 87 aaKnown RBP6.35□□□□□ -1.39
LINC01961-201ENST00000449954 ATP5F1P24539 256 aaPredicted RBP6.35□□□□□ -1.39
LINC01961-201ENST00000449954 ACAA2P42765 397 aaKnown RBP6.35□□□□□ -1.39
LINC01961-201ENST00000449954 VDAC2P45880 294 aaPredicted RBP6.35□□□□□ -1.39
LINC01961-201ENST00000449954 ZNF84P51523 738 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 UBE2E1P51965 193 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 NAA20P61599 178 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 UAP1Q16222 522 aaPredicted RBP6.35□□□□□ -1.39
LINC01961-201ENST00000449954 MS4A18Q3C1V0 323 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 FAM201AQ5SY85 155 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 LIPMQ5VYY2 423 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 NCR3LG1Q68D85 454 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 WDR88Q6ZMY6 472 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 BTN2A1Q7KYR7 527 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 PXKQ7Z7A4 578 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 MOGAT3Q86VF5 341 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 ATG16L2Q8NAA4 619 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 OR10AD1Q8NGE0 317 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 OR4X2Q8NGF9 303 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 OR6S1Q8NH40 331 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 OR6X1Q8NH79 312 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 TAAR8Q969N4 342 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 ZNF566Q969W8 418 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 ERGIC1Q969X5 290 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 SLC41A3Q96GZ6 507 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 TXNDC15Q96J42 360 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 TRNT1Q96Q11 434 aaKnown RBP6.35□□□□□ -1.39
LINC01961-201ENST00000449954 OR5M11Q96RB7 305 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 TRIM31Q9BZY9 425 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 SLC38A1Q9H2H9 487 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 SMURF1Q9HCE7 757 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 NANSQ9NR45 359 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 TMCC3Q9ULS5 477 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 DNAH10Q8IVF4 4471 aa6.35□□□□□ -1.39
LINC01961-201ENST00000449954 HERC1Q15751 4861 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 KMT2AQ03164 3969 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 TRAV36DV7A0A075B6V5 113 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 EXOC1LA0A1B0GW35 172 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 A0A1B0GW55 424 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 ADAM20O43506 726 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 GSTA1P08263 222 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 INHBAP08476 426 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 GKN3PP0CG01 181 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 DUX4L2P0CJ85 424 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 DUX4L3P0CJ86 424 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 DUX4L5P0CJ88 424 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 DUX4L6P0CJ89 424 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 DUX4L7P0CJ90 424 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 HOXA5P20719 270 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 MYF6P23409 242 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 BMXP51813 675 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 PRKAA2P54646 552 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 BIDP55957 195 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 GUCY1A3Q02108 690 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 CALCOCO2Q13137 446 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 CNN3Q15417 329 aaKnown RBP6.34□□□□□ -1.39
LINC01961-201ENST00000449954 VMACQ2NL98 169 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 DPY19L1Q2PZI1 675 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 LIN52Q52LA3 116 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 RFTN2Q52LD8 501 aaPredicted RBP6.34□□□□□ -1.39
LINC01961-201ENST00000449954 TNFAIP8L2Q6P589 184 aaPredicted RBP6.34□□□□□ -1.39
LINC01961-201ENST00000449954 DUX4L9Q6RFH8 374 aaPredicted RBP6.34□□□□□ -1.39
LINC01961-201ENST00000449954 RNF165Q6ZSG1 346 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 OR11L1Q8NGX0 322 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 IL17DQ8TAD2 202 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 Q8TCH9 128 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 MYDGFQ969H8 173 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 COQ8BQ96D53 544 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 C4orf45Q96LM5 186 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 COG8Q96MW5 612 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 SPATA9Q9BWV2 254 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 GSTO2Q9H4Y5 243 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 RMND5AQ9H871 391 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 MTHFD2LQ9H903 347 aaPredicted RBP6.34□□□□□ -1.39
LINC01961-201ENST00000449954 C12orf10Q9HB07 376 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.34□□□□□ -1.39
LINC01961-201ENST00000449954 DUX4Q9UBX2 424 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 CHST2Q9Y4C5 530 aa6.34□□□□□ -1.39
LINC01961-201ENST00000449954 A0A1W2PRD5 423 aa6.33□□□□□ -1.4
LINC01961-201ENST00000449954 A0A1W2PRF3 423 aa6.33□□□□□ -1.4
LINC01961-201ENST00000449954 A0A1W2PRM7 423 aa6.33□□□□□ -1.4
LINC01961-201ENST00000449954 LSM1O15116 133 aaKnown RBP6.33□□□□□ -1.4
LINC01961-201ENST00000449954 GLRA3O75311 464 aa6.33□□□□□ -1.4
LINC01961-201ENST00000449954 LYPLA1O75608 230 aaPredicted RBP6.33□□□□□ -1.4
LINC01961-201ENST00000449954 SERPINI2O75830 405 aa6.33□□□□□ -1.4
LINC01961-201ENST00000449954 ABHD16AO95870 558 aa6.33□□□□□ -1.4
LINC01961-201ENST00000449954 ZNF32P17041 273 aa6.33□□□□□ -1.4
LINC01961-201ENST00000449954 THBS3P49746 956 aa6.33□□□□□ -1.4
LINC01961-201ENST00000449954 C2orf54Q08AI8 447 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms