RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 LRRN1Q6UXK5 716 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 KRT77Q7Z794 578 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 SATL1Q86VE3 508 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 TMIGD2Q96BF3 282 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 HDHD2Q9H0R4 259 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 GNG8Q9UK08 70 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 LRP12Q9Y561 859 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 ARPC4-TTLL3A0A0A6YYG9 625 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 MAGEB4O15481 346 aaPredicted RBP16.85■□□□□ 0.29
RPS28-202ENST00000449223 CD1AP06126 327 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 CPEP16870 476 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 ZNF32P17041 273 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 PSMB1P20618 241 aaKnown RBP16.85■□□□□ 0.29
RPS28-202ENST00000449223 BMP5P22003 454 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 OTX1P32242 354 aaPredicted RBP16.85■□□□□ 0.29
RPS28-202ENST00000449223 RIDAP52758 137 aaKnown RBP16.85■□□□□ 0.29
RPS28-202ENST00000449223 TLE1Q04724 770 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 RAB35Q15286 201 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 TBRG1Q3YBR2 411 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 CCDC92Q53HC0 331 aaPredicted RBP16.85■□□□□ 0.29
RPS28-202ENST00000449223 ELFN2Q5R3F8 820 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 SFRP5Q5T4F7 317 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 GPR141Q7Z602 305 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 KLBQ86Z14 1044 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 ELOVL3Q9HB03 270 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 B3GNT2Q9NY97 397 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 IKZF2Q9UKS7 526 aa16.85■□□□□ 0.29
RPS28-202ENST00000449223 ESPL1Q14674 2120 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 A0A096LPE4 126 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 A0A1W2PPZ6 126 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 B8ZZF3 427 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 PSMD9O00233 223 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 CCL21O00585 134 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 OGG1O15527 345 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 SYNGR3O43761 229 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 SRSF10O75494 262 aaKnown RBP16.84■□□□□ 0.29
RPS28-202ENST00000449223 UBL3O95164 117 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 HSMCR30P0CW71 290 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 LIPAP38571 399 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 RGS6P49758 472 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 GBX2P52951 348 aaPredicted RBP16.84■□□□□ 0.29
RPS28-202ENST00000449223 ECH1Q13011 328 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 NCCRP1Q6ZVX7 275 aaPredicted RBP16.84■□□□□ 0.29
RPS28-202ENST00000449223 YIPF7Q8N8F6 280 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 RELL2Q8NC24 303 aaPredicted RBP16.84■□□□□ 0.29
RPS28-202ENST00000449223 FGFBP3Q8TAT2 258 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 NANOS1Q8WY41 292 aaKnown RBP16.84■□□□□ 0.29
RPS28-202ENST00000449223 OR2H1Q9GZK4 316 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 OBP2BQ9NPH6 170 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 GALNT8Q9NY28 637 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 ST6GALNAC2Q9UJ37 374 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 PCNX1Q96RV3 2341 aa16.84■□□□□ 0.29
RPS28-202ENST00000449223 A0A1B0GUH1 482 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 OR6C6A6NF89 314 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 A6NHS1 94 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 E9PI62 339 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 CCRL2O00421 344 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 SGCEO43556 437 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 PLPP2O43688 288 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 LYZL6O75951 148 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 CD53P19397 219 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 ARR3P36575 388 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 TGFBR2P37173 567 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 MMP16P51512 607 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 GRB2P62993 217 aaKnown RBP16.83■□□□□ 0.28
RPS28-202ENST00000449223 PSG4Q00888 419 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 SSX1Q16384 188 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 KRTAP27-1Q3LI81 207 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 HIKESHIQ53FT3 197 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 DMKNQ6E0U4 476 aaPredicted RBP16.83■□□□□ 0.28
RPS28-202ENST00000449223 RPL22L1Q6P5R6 122 aaKnown RBP16.83■□□□□ 0.28
RPS28-202ENST00000449223 MYO7BQ6PIF6 2116 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 CXorf67Q86X51 503 aaPredicted RBP16.83■□□□□ 0.28
RPS28-202ENST00000449223 LIX1LQ8IVB5 337 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 PHC2Q8IXK0 858 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 UFD1Q92890 307 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 YIPF6Q96EC8 236 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 ATF6BQ99941 703 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 HDHD5Q9BXW7 423 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 WNT5BQ9H1J7 359 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 NDUFB11Q9NX14 153 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 ELOVL5Q9NYP7 299 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 PLEK2Q9NYT0 353 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 NDUFA13Q9P0J0 144 aa16.83■□□□□ 0.28
RPS28-202ENST00000449223 SMIM31A0A1B0GVY4 71 aa16.82■□□□□ 0.28
RPS28-202ENST00000449223 DPPA5A6NC42 116 aa16.82■□□□□ 0.28
RPS28-202ENST00000449223 ZNF503-AS2A6NEH8 195 aa16.82■□□□□ 0.28
RPS28-202ENST00000449223 H2BFMP0C1H6 154 aa16.82■□□□□ 0.28
RPS28-202ENST00000449223 COX5BP10606 129 aa16.82■□□□□ 0.28
RPS28-202ENST00000449223 CRYGSP22914 178 aa16.82■□□□□ 0.28
RPS28-202ENST00000449223 GTF2A1P52655 376 aaPredicted RBP16.82■□□□□ 0.28
RPS28-202ENST00000449223 CDK5R1Q15078 307 aa16.82■□□□□ 0.28
RPS28-202ENST00000449223 STAC2Q6ZMT1 411 aa16.82■□□□□ 0.28
RPS28-202ENST00000449223 SMIM19Q96E16 107 aa16.82■□□□□ 0.28
RPS28-202ENST00000449223 COQ7Q99807 217 aa16.82■□□□□ 0.28
RPS28-202ENST00000449223 RBM38Q9H0Z9 239 aaKnown RBP16.82■□□□□ 0.28
RPS28-202ENST00000449223 CENPMQ9NSP4 180 aa16.82■□□□□ 0.28
RPS28-202ENST00000449223 SLC5A6Q9Y289 635 aa16.82■□□□□ 0.28
RPS28-202ENST00000449223 HIVEP3Q5T1R4 2406 aa16.82■□□□□ 0.28
RPS28-202ENST00000449223 RELNP78509 3460 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms