RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 FAM169BQ8N8A8 192 aa12.75□□□□□ -0.37
SHANK2-210ENST00000449116 CLEC18CQ8NCF0 446 aa12.75□□□□□ -0.37
SHANK2-210ENST00000449116 OR10S1Q8NGN2 331 aa12.75□□□□□ -0.37
SHANK2-210ENST00000449116 AKR7LQ8NHP1 331 aa12.75□□□□□ -0.37
SHANK2-210ENST00000449116 SIGLEC11Q96RL6 698 aa12.75□□□□□ -0.37
SHANK2-210ENST00000449116 MED18Q9BUE0 208 aa12.75□□□□□ -0.37
SHANK2-210ENST00000449116 TTTY10Q9BZA0 68 aa12.75□□□□□ -0.37
SHANK2-210ENST00000449116 HDHD2Q9H0R4 259 aa12.75□□□□□ -0.37
SHANK2-210ENST00000449116 NPDC1Q9NQX5 325 aaPredicted RBP12.75□□□□□ -0.37
SHANK2-210ENST00000449116 CHCHD3Q9NX63 227 aaKnown RBP12.75□□□□□ -0.37
SHANK2-210ENST00000449116 ERVK13-1Q9NX77 482 aa12.75□□□□□ -0.37
SHANK2-210ENST00000449116 ERVK-18Q9QC07 812 aa12.75□□□□□ -0.37
SHANK2-210ENST00000449116 CRNNQ9UBG3 495 aaPredicted RBP12.75□□□□□ -0.37
SHANK2-210ENST00000449116 NDRG3Q9UGV2 375 aa12.75□□□□□ -0.37
SHANK2-210ENST00000449116 UBR5O95071 2799 aaPredicted RBP12.75□□□□□ -0.37
SHANK2-210ENST00000449116 GCN1Q92616 2671 aaKnown RBP12.75□□□□□ -0.37
SHANK2-210ENST00000449116 IQCMA0A1B0GVH7 501 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 ZNF878C9JN71 531 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 SYNGR3O43761 229 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 MRPS14O60783 128 aaKnown RBP12.74□□□□□ -0.37
SHANK2-210ENST00000449116 LIMS3P0CW19 117 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 LIMS4P0CW20 117 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 ACTA2P62736 377 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 ACTG2P63267 376 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 ROM1Q03395 351 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 ECH1Q13011 328 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 GALEQ14376 348 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 RAB39AQ14964 217 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 RNLSQ5VYX0 342 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 C22orf34Q6ZV56 151 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 SPATC1Q76KD6 591 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 RHOUQ7L0Q8 258 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 SSX6Q7RTT6 188 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 LHFPL3Q86UP9 236 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 OR1F12Q8NHA8 337 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 MRPL48Q96GC5 212 aaKnown RBP12.74□□□□□ -0.37
SHANK2-210ENST00000449116 ZNF75AQ96N20 296 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 WFIKKN1Q96NZ8 548 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 OR8B4Q96RC9 309 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 COQ7Q99807 217 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 ATF6BQ99941 703 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 ZNF649Q9BS31 505 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 ALG8Q9BVK2 526 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 CDCA4Q9BXL8 241 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 MROQ9BYG7 248 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 CCDC90BQ9GZT6 254 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 ZNF696Q9H7X3 374 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 CENPMQ9NSP4 180 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 DDX28Q9NUL7 540 aaKnown RBP12.74□□□□□ -0.37
SHANK2-210ENST00000449116 ATPIF1Q9UII2 106 aa12.74□□□□□ -0.37
SHANK2-210ENST00000449116 KLF2Q9Y5W3 355 aaPredicted RBP12.74□□□□□ -0.37
SHANK2-210ENST00000449116 CACNA1CQ13936 2221 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 OR6C6A6NF89 314 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 TRIM64A6NGJ6 449 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 TUBAL3A6NHL2 446 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 PRR32B1ATL7 298 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 PTHP01270 115 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 MT-ND2P03891 347 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 SERPINA5P05154 406 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 KRT8P05787 483 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 THBDP07204 575 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 H2BFMP0C1H6 154 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 COX5BP10606 129 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 ZNF14P17017 642 aaPredicted RBP12.73□□□□□ -0.37
SHANK2-210ENST00000449116 OPRL1P41146 370 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 HTR5AP47898 357 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 ETV1P50549 477 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 IDH3GP51553 393 aaPredicted RBP12.73□□□□□ -0.37
SHANK2-210ENST00000449116 GRB2P62993 217 aaKnown RBP12.73□□□□□ -0.37
SHANK2-210ENST00000449116 SNTB1Q13884 538 aaKnown RBP12.73□□□□□ -0.37
SHANK2-210ENST00000449116 TAF13Q15543 124 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 C3orf36Q3SXR2 165 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 CDONQ4KMG0 1287 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 ALKBH2Q6NS38 261 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 DEGS2Q6QHC5 323 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 LRRN1Q6UXK5 716 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 KRT77Q7Z794 578 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 WFDC8Q8IUA0 241 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 ZNF584Q8IVC4 421 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 ZNF679Q8IYX0 411 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 KLHL36Q8N4N3 616 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 CPEB3Q8NE35 698 aaKnown RBP12.73□□□□□ -0.37
SHANK2-210ENST00000449116 LINC01560Q8TB33 94 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 SNX33Q8WV41 574 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 ZC3HAV1LQ96H79 300 aaKnown RBP12.73□□□□□ -0.37
SHANK2-210ENST00000449116 C1QTNF6Q9BXI9 259 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 SLCO1C1Q9NYB5 712 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 NPAP1Q9NZP6 1156 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 CLEC2DQ9UHP7 191 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 MRM2Q9UI43 246 aaKnown RBP12.73□□□□□ -0.37
SHANK2-210ENST00000449116 IKZF2Q9UKS7 526 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 ERGIC3Q9Y282 383 aa12.73□□□□□ -0.37
SHANK2-210ENST00000449116 DOPEY1Q5JWR5 2465 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 SETXQ7Z333 2677 aaKnown RBP12.72□□□□□ -0.37
SHANK2-210ENST00000449116 C19orf84I3L1E1 186 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 PSMD9O00233 223 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 MYL12BO14950 172 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 ZNF254O75437 659 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 SULT1C4O75897 302 aa12.72□□□□□ -0.37
SHANK2-210ENST00000449116 IGLV1-44P01699 117 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms