RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 SYNGR3O43761 229 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 SSX4O60224 188 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 ABHD16AO95870 558 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 CLPTM1O96005 669 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 DBHP09172 617 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 PRR23D2P0DMB1 279 aaPredicted RBP10.25□□□□□ -0.77
RFC4-208ENST00000447345 BMP4P12644 408 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 PAX1P15863 534 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 EPHA2P29317 976 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 RAD52P43351 418 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 SLC25A1P53007 311 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 NUDT6P53370 316 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 UCP2P55851 309 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 CDK5Q00535 292 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 ZSCAN26Q16670 478 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 KLHL12Q53G59 568 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 SHEQ5VZ18 495 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 KDM4DQ6B0I6 523 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 SLC18B1Q6NT16 456 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 TGIF2LYQ8IUE0 185 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 ZCCHC24Q8N2G6 241 aaKnown RBP10.25□□□□□ -0.77
RFC4-208ENST00000447345 PARP8Q8N3A8 854 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 ZNF511Q8NB15 262 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 GJC3Q8NFK1 279 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 OR2AJ1Q8NGZ0 328 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 OR1F12Q8NHA8 337 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 STMN2Q93045 179 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 SORCS2Q96PQ0 1159 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 PITX2Q99697 317 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 WACQ9BTA9 647 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 TEX12Q9BXU0 123 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 BCL2L14Q9BZR8 327 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 GRIP2Q9C0E4 1043 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 TPK1Q9H3S4 243 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 RIBC2Q9H4K1 309 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 WDR76Q9H967 626 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 S100A14Q9HCY8 104 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 HINT3Q9NQE9 182 aaKnown RBP10.25□□□□□ -0.77
RFC4-208ENST00000447345 TVP23BQ9NYZ1 205 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 EIF3KQ9UBQ5 218 aaKnown RBP10.25□□□□□ -0.77
RFC4-208ENST00000447345 GRIP1Q9Y3R0 1128 aa10.25□□□□□ -0.77
RFC4-208ENST00000447345 OR6C6A6NF89 314 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 ERICH4A6NGS2 130 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 H7C417 338 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 NGFP01138 241 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 HMGN1P05114 100 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 COX5BP10606 129 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 PCSK6P29122 969 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 FMO3P31513 532 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 GGT2P36268 569 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 ALDH3B1P43353 468 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 RPS7P62081 194 aaKnown RBP10.24□□□□□ -0.77
RFC4-208ENST00000447345 GABPB1Q06547 395 aaPredicted RBP10.24□□□□□ -0.77
RFC4-208ENST00000447345 PTGES3Q15185 160 aaKnown RBP10.24□□□□□ -0.77
RFC4-208ENST00000447345 SNAPC1Q16533 368 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 ELFN2Q5R3F8 820 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 SPATC1Q76KD6 591 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 ERI1Q8IV48 349 aaKnown RBP10.24□□□□□ -0.77
RFC4-208ENST00000447345 CPOQ8IVL8 374 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 BBS1Q8NFJ9 593 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 SLC25A40Q8TBP6 338 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 ZMYND19Q96E35 227 aaPredicted RBP10.24□□□□□ -0.77
RFC4-208ENST00000447345 MAP6Q96JE9 813 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 C4orf45Q96LM5 186 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 HDHD2Q9H0R4 259 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 CYB5R1Q9UHQ9 305 aa10.24□□□□□ -0.77
RFC4-208ENST00000447345 TMEFF2Q9UIK5 374 aaPredicted RBP10.24□□□□□ -0.77
RFC4-208ENST00000447345 TMEM129A0AVI4 362 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 M0R233 179 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 EI24O14681 340 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 BAG2O95816 211 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 ADRA2AP08913 450 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 NAT2P11245 290 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 POLR2IP36954 125 aaKnown RBP10.23□□□□□ -0.77
RFC4-208ENST00000447345 MPV17P39210 176 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 ENTPD1P49961 510 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 PPOXP50336 477 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 KLF3P57682 345 aaPredicted RBP10.23□□□□□ -0.77
RFC4-208ENST00000447345 PPP1CBP62140 327 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 ESRRGP62508 458 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 HIST1H3AP68431 136 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 PPP2R2BQ00005 443 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 NKPD1Q17RQ9 610 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 CLEC12BQ2HXU8 276 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 HIST2H3PS2Q5TEC6 136 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 LINC01590Q5TEZ4 76 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 HIST2H3AQ71DI3 136 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 CXXC5Q7LFL8 322 aaKnown RBP10.23□□□□□ -0.77
RFC4-208ENST00000447345 DCXRQ7Z4W1 244 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 LURAP1LQ8IV03 231 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 C10orf67Q8IYJ2 551 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 ZNF525Q8N782 197 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 OR6N2Q8NGY6 317 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 SYNPRQ8TBG9 265 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 IPCEF1Q8WWN9 437 aaPredicted RBP10.23□□□□□ -0.77
RFC4-208ENST00000447345 DOK1Q99704 481 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 COQ7Q99807 217 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 ATF6BQ99941 703 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 OSBPL10Q9BXB5 764 aa10.23□□□□□ -0.77
RFC4-208ENST00000447345 OR2J1Q9GZK6 312 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms