RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 EXD3Q8N9H8 876 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 SERINC2Q96SA4 455 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 STARD5Q9NSY2 213 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 LRIT1Q9P2V4 623 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 METTL1Q9UBP6 276 aaKnown RBP12.55□□□□□ -0.4
VPS52-212ENST00000445902 ARHGEF17Q96PE2 2063 aaPredicted RBP12.55□□□□□ -0.4
VPS52-212ENST00000445902 COL4A6Q14031 1691 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 LMX1BO60663 402 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 EML2O95834 649 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 IL2RAP01589 272 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 CD2P06729 351 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 FBP1P09467 338 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 OR8U9P0C7N5 309 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 NME1P15531 152 aaKnown RBP12.55□□□□□ -0.4
VPS52-212ENST00000445902 AGAP20933 346 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 MAOAP21397 527 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 ACKR3P25106 362 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 GPR18Q14330 331 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 POMZP3Q6PJE2 187 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 OR8U1Q8NH10 309 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 RBM18Q96H35 190 aaKnown RBP12.55□□□□□ -0.4
VPS52-212ENST00000445902 SLC25A44Q96H78 314 aaPredicted RBP12.55□□□□□ -0.4
VPS52-212ENST00000445902 KIRREL1Q96J84 757 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 INTS14Q96SY0 518 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 RAB11FIP5Q9BXF6 653 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 CACFD1Q9UGQ2 172 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 B9D1Q9UPM9 204 aa12.55□□□□□ -0.4
VPS52-212ENST00000445902 IGKV1D-42A0A075B6H8 117 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 NUDT19A8MXV4 375 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 PRAMEF26H0Y7S4 382 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 TACR3P29371 465 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 ADPRHP54922 357 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 PRPS1P60891 318 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 RPS4XP62701 263 aaKnown RBP12.54□□□□□ -0.4
VPS52-212ENST00000445902 MGAT2Q10469 447 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 RNF212Q495C1 297 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 FAM166AQ6J272 317 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 SLC43A2Q8N370 569 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 OR4C3Q8NH37 302 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 CHD7Q9P2D1 2997 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 EDDM13A0A1B0GTR0 161 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 RHOP08100 348 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 HLA-GP17693 338 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 EIF2S3P41091 472 aaKnown RBP12.54□□□□□ -0.4
VPS52-212ENST00000445902 S100A10P60903 97 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 ACTR1AP61163 376 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 ADGRE4PQ86SQ3 457 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 LILRB2Q8N423 598 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 OR10G6Q8NH81 332 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 ADAMTS17Q8TE56 1095 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 TCTEX1D2Q8WW35 142 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 SPACA7Q96KW9 195 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 RHOVQ96L33 236 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 TSPAN32Q96QS1 320 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 TCEAL7Q9BRU2 100 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 NUDT9Q9BW91 350 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 GSKIPQ9P0R6 139 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 OTOL1A6NHN0 477 aaPredicted RBP12.54□□□□□ -0.4
VPS52-212ENST00000445902 C11orf98E9PRG8 122 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 EIF1AYO14602 144 aaKnown RBP12.54□□□□□ -0.4
VPS52-212ENST00000445902 OR10H2O60403 315 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 YIF1AO95070 293 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 SPARCP09486 303 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 EIF1AXP47813 144 aaKnown RBP12.54□□□□□ -0.4
VPS52-212ENST00000445902 NAAAQ02083 359 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 SKP2Q13309 424 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 ENPP2Q13822 863 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 MARCH3Q86UD3 253 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 FRMD1Q8N878 549 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 EGLN1Q9GZT9 426 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 CKLFQ9UBR5 152 aa12.54□□□□□ -0.4
VPS52-212ENST00000445902 C7orf77A4D0Y5 90 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 DUS4LO95620 317 aaKnown RBP12.53□□□□□ -0.4
VPS52-212ENST00000445902 GPR75O95800 540 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 MT-ND4LP03901 98 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 IFNA6P05013 189 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 GNB3P16520 340 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 RPS15AP62244 130 aaKnown RBP12.53□□□□□ -0.4
VPS52-212ENST00000445902 DEFB103AP81534 67 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 RPL18Q07020 188 aaKnown RBP12.53□□□□□ -0.4
VPS52-212ENST00000445902 MEF2DQ14814 521 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 Q6ZRG5 221 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.53□□□□□ -0.4
VPS52-212ENST00000445902 ZNF550Q7Z398 422 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 RCBTB1Q8NDN9 531 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 OR4D6Q8NGJ1 314 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 ASB5Q8WWX0 329 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 SMIM8Q96KF7 97 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 GGACTQ9BVM4 153 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 SLC17A5Q9NRA2 495 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 WRBO00258 174 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 NKX2-2O95096 273 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 PVRP15151 417 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 RAB5AP20339 215 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 ARRB1P49407 418 aaPredicted RBP12.53□□□□□ -0.4
VPS52-212ENST00000445902 DRAM2Q6UX65 266 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 RNF128Q8TEB7 428 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 LPAR4Q99677 370 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 SMIM3Q9BZL3 60 aa12.53□□□□□ -0.4
VPS52-212ENST00000445902 TAF9BQ9HBM6 251 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms