RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 OR2AK2Q8NG84 335 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 POC1BQ8TC44 478 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 C11orf40Q8WZ69 217 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 PNPLA2Q96AD5 504 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 ELMOD3Q96FG2 381 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 SHDQ96IW2 340 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 C5orf34Q96MH7 638 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 CMKLR1Q99788 373 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 GAL3ST1Q99999 423 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 SCPEP1Q9HB40 452 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 APMAPQ9HDC9 416 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 FAM206AQ9NX38 181 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 MAB21L2Q9Y586 359 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 A0A1W2PNV4 684 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 A0A1W2PQM1 296 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 P2RY10O00398 339 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 SCRG1O75711 98 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 ITGB2P05107 769 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 H2BFMP0C1H6 154 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 UBCP0CG48 685 aaKnown RBP14.28□□□□□ -0.12
SHQ1-202ENST00000444040 BIDP55957 195 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 TAS2R19P59542 299 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 MOGAT2Q3SYC2 334 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 OR10K2Q6IF99 312 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 JAGN1Q8N5M9 183 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 OR4D6Q8NGJ1 314 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 PCNPQ8WW12 178 aaKnown RBP14.28□□□□□ -0.12
SHQ1-202ENST00000444040 MRPL13Q9BYD1 178 aaKnown RBP14.28□□□□□ -0.12
SHQ1-202ENST00000444040 ALX4Q9H161 411 aaPredicted RBP14.28□□□□□ -0.12
SHQ1-202ENST00000444040 CENPMQ9NSP4 180 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 GLTPQ9NZD2 209 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 KLRF1Q9NZS2 232 aa14.28□□□□□ -0.12
SHQ1-202ENST00000444040 CABIN1Q9Y6J0 2220 aa14.27□□□□□ -0.12
SHQ1-202ENST00000444040 A0A0A6YYH2 397 aa14.27□□□□□ -0.12
SHQ1-202ENST00000444040 A6NJ64 397 aa14.27□□□□□ -0.12
SHQ1-202ENST00000444040 SIX6O95475 246 aa14.27□□□□□ -0.12
SHQ1-202ENST00000444040 PNLIPP16233 465 aa14.27□□□□□ -0.12
SHQ1-202ENST00000444040 EMP2P54851 167 aa14.27□□□□□ -0.12
SHQ1-202ENST00000444040 UBE2MP61081 183 aaKnown RBP14.27□□□□□ -0.12
SHQ1-202ENST00000444040 DCDP81605 110 aaKnown RBP14.27□□□□□ -0.12
SHQ1-202ENST00000444040 PLPPR5Q32ZL2 321 aa14.27□□□□□ -0.12
SHQ1-202ENST00000444040 GUSBP11Q6P575 273 aa14.27□□□□□ -0.12
SHQ1-202ENST00000444040 SDK1Q7Z5N4 2213 aa14.27□□□□□ -0.12
SHQ1-202ENST00000444040 PTX4Q96A99 478 aa14.27□□□□□ -0.12
SHQ1-202ENST00000444040 MRGPRX4Q96LA9 322 aa14.27□□□□□ -0.12
SHQ1-202ENST00000444040 C1orf198Q9H425 327 aa14.27□□□□□ -0.12
SHQ1-202ENST00000444040 CYB5R1Q9UHQ9 305 aa14.27□□□□□ -0.12
SHQ1-202ENST00000444040 RPH3AQ9Y2J0 694 aaPredicted RBP14.27□□□□□ -0.12
SHQ1-202ENST00000444040 LY6G6EA0A0G2JKS1 128 aa14.27□□□□□ -0.13
SHQ1-202ENST00000444040 ACSM4P0C7M7 580 aa14.27□□□□□ -0.13
SHQ1-202ENST00000444040 PMPCAQ10713 525 aa14.27□□□□□ -0.13
SHQ1-202ENST00000444040 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.27□□□□□ -0.13
SHQ1-202ENST00000444040 NKAIN3Q8N8D7 197 aa14.27□□□□□ -0.13
SHQ1-202ENST00000444040 OR5L2Q8NGL0 311 aa14.27□□□□□ -0.13
SHQ1-202ENST00000444040 OR10S1Q8NGN2 331 aa14.27□□□□□ -0.13
SHQ1-202ENST00000444040 SFXN2Q96NB2 322 aa14.27□□□□□ -0.13
SHQ1-202ENST00000444040 GSX2Q9BZM3 304 aa14.27□□□□□ -0.13
SHQ1-202ENST00000444040 PPP4R1LQ9P1A2 415 aa14.27□□□□□ -0.13
SHQ1-202ENST00000444040 MYEF2Q9P2K5 600 aaKnown RBP14.27□□□□□ -0.13
SHQ1-202ENST00000444040 B3GALT1Q9Y5Z6 326 aa14.27□□□□□ -0.13
SHQ1-202ENST00000444040 U3KQA8 63 aa14.27□□□□□ -0.13
SHQ1-202ENST00000444040 IGLV3-32A0A0A0MS00 114 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 OR6C65A6NJZ3 312 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 L7N2F9 121 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 MEN1O00255 615 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 EIF1AYO14602 144 aaKnown RBP14.26□□□□□ -0.13
SHQ1-202ENST00000444040 TTRP02766 147 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 MSX1P28360 303 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 OC90Q02509 493 aaPredicted RBP14.26□□□□□ -0.13
SHQ1-202ENST00000444040 MYBPHQ13203 477 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 HYAL4Q2M3T9 481 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 ZNF813Q6ZN06 617 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 CPEB2Q7Z5Q1 589 aaKnown RBP14.26□□□□□ -0.13
SHQ1-202ENST00000444040 CCDC28AQ8IWP9 274 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 GALNT16Q8N428 558 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 CLDN23Q96B33 292 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 SLAMF6Q96DU3 332 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 SPSB2Q99619 263 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 EXO5Q9H790 373 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 MYOTQ9UBF9 498 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 CPED1A4D0V7 1026 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 WIPF3A6NGB9 483 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 SNAPC5O75971 98 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 RAB3DO95716 219 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 ONECUT2O95948 504 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 C4BPBP20851 252 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 AP2S1P53680 142 aaPredicted RBP14.26□□□□□ -0.13
SHQ1-202ENST00000444040 KIF26BQ2KJY2 2108 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 CDH26Q8IXH8 852 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 OR10G3Q8NGC4 313 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 SLCO5A1Q9H2Y9 848 aa14.26□□□□□ -0.13
SHQ1-202ENST00000444040 ZMAT3Q9HA38 289 aaKnown RBP14.26□□□□□ -0.13
SHQ1-202ENST00000444040 HMSDA8MTL9 139 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 SHOXO15266 292 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 ZNF735P0CB33 412 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 CXCL12P48061 93 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 P2RY4P51582 365 aa14.25□□□□□ -0.13
SHQ1-202ENST00000444040 ZNF41P51814 821 aaPredicted RBP14.25□□□□□ -0.13
SHQ1-202ENST00000444040 INPP5JQ15735 1006 aaPredicted RBP14.25□□□□□ -0.13
SHQ1-202ENST00000444040 FAM69BQ5VUD6 431 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms