RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 DLL4Q9NR61 685 aa11.03□□□□□ -0.64
PDLIM2-212ENST00000443561 FBXL3Q9UKT7 428 aa11.03□□□□□ -0.64
PDLIM2-212ENST00000443561 KLHDC2Q9Y2U9 406 aa11.03□□□□□ -0.64
PDLIM2-212ENST00000443561 IGLV3-9A0A075B6K5 115 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 IQCMA0A1B0GVH7 501 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 C5orf49A4QMS7 147 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 RIIAD1A6NNX1 92 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 H7C417 338 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 ZNF3P17036 446 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 PCSK6P29122 969 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 SERPINF1P36955 418 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 HTR5AP47898 357 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 CENPAP49450 140 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 ESRRGP62508 458 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 SCRN3Q0VDG4 424 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 MAD2L1BPQ15013 274 aaPredicted RBP11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 RAB35Q15286 201 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 TBC1D28Q2M2D7 210 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 ALKBH6Q3KRA9 238 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 Q5PR19 223 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 SPATA46Q5T0L3 261 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 AGAP6Q5VW22 663 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 FBXL14Q8N1E6 418 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 ZCCHC24Q8N2G6 241 aaKnown RBP11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 CBR4Q8N4T8 237 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 PROKR2Q8NFJ6 384 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 OR2T4Q8NH00 348 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 OR1F12Q8NHA8 337 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 MARS2Q96GW9 593 aaKnown RBP11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 KCNS3Q9BQ31 491 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 SYT3Q9BQG1 590 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 WACQ9BTA9 647 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 C1orf198Q9H425 327 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 CDH20Q9HBT6 801 aa11.02□□□□□ -0.65
PDLIM2-212ENST00000443561 A0A096LNT2 108 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 SELENOFO60613 162 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 TMCC2O75069 709 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 GLCEO94923 617 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 ZNF250P15622 560 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 OTX1P32242 354 aaPredicted RBP11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 APLNRP35414 380 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 ARHGDIAP52565 204 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 UCP2P55851 309 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 PCBD1P61457 104 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 PLP2Q04941 152 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 ELFN2Q5R3F8 820 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 AADACL4Q5VUY2 407 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 NAA40Q86UY6 237 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 DEPDC4Q8N2C3 294 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 CIARTQ8N365 385 aaPredicted RBP11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 RFLNBQ8N5W9 214 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 UBE2FQ969M7 185 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 ZMYND19Q96E35 227 aaPredicted RBP11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 KCNN2Q9H2S1 579 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 PLEK2Q9NYT0 353 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 TVP23BQ9NYZ1 205 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 ATPIF1Q9UII2 106 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 KCNG2Q9UJ96 466 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 ABCA2Q9BZC7 2435 aa11.01□□□□□ -0.65
PDLIM2-212ENST00000443561 ZANQ9Y493 2812 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 B9A039 149 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 PRR23D1E9PI22 279 aaPredicted RBP11□□□□□ -0.65
PDLIM2-212ENST00000443561 IFNGP01579 166 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 PRR23D2P0DMB1 279 aaPredicted RBP11□□□□□ -0.65
PDLIM2-212ENST00000443561 CCNOP22674 350 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 ENTPD1P49961 510 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 GDI2P50395 445 aaKnown RBP11□□□□□ -0.65
PDLIM2-212ENST00000443561 ATP5J2P56134 94 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 HNRNPA0Q13151 305 aaKnown RBP11□□□□□ -0.65
PDLIM2-212ENST00000443561 TEX30Q5JUR7 227 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 TMEM154Q6P9G4 183 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 COLCA1Q6ZS62 124 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 CXXC5Q7LFL8 322 aaKnown RBP11□□□□□ -0.65
PDLIM2-212ENST00000443561 DCXRQ7Z4W1 244 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 TGIF2LYQ8IUE0 185 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 TCEANCQ8N8B7 351 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 OR6K6Q8NGW6 343 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 SLC25A40Q8TBP6 338 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 IPCEF1Q8WWN9 437 aaPredicted RBP11□□□□□ -0.65
PDLIM2-212ENST00000443561 C4orf45Q96LM5 186 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 COQ7Q99807 217 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 OR2J1Q9GZK6 312 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 OR51V1Q9H2C8 321 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 CXorf56Q9H5V9 222 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 DDX28Q9NUL7 540 aaKnown RBP11□□□□□ -0.65
PDLIM2-212ENST00000443561 POLR1DQ9Y2S0 133 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 STARD10Q9Y365 291 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 CMAHPQ9Y471 501 aa11□□□□□ -0.65
PDLIM2-212ENST00000443561 TRIM64A6NGJ6 449 aa10.99□□□□□ -0.65
PDLIM2-212ENST00000443561 ERICH4A6NGS2 130 aa10.99□□□□□ -0.65
PDLIM2-212ENST00000443561 TRIM64BA6NI03 449 aa10.99□□□□□ -0.65
PDLIM2-212ENST00000443561 PRODHO43272 600 aa10.99□□□□□ -0.65
PDLIM2-212ENST00000443561 NCR1O76036 304 aa10.99□□□□□ -0.65
PDLIM2-212ENST00000443561 PTHP01270 115 aa10.99□□□□□ -0.65
PDLIM2-212ENST00000443561 HLA-DQA2P01906 255 aa10.99□□□□□ -0.65
PDLIM2-212ENST00000443561 HMGN1P05114 100 aa10.99□□□□□ -0.65
PDLIM2-212ENST00000443561 ACSM4P0C7M7 580 aa10.99□□□□□ -0.65
PDLIM2-212ENST00000443561 GSTT1P30711 240 aa10.99□□□□□ -0.65
PDLIM2-212ENST00000443561 FMO3P31513 532 aa10.99□□□□□ -0.65
PDLIM2-212ENST00000443561 RBMXP38159 391 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms