RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 CDH20Q9HBT6 801 aa11.78□□□□□ -0.52
TM9SF4-204ENST00000442842 SLC24A3Q9HC58 644 aa11.78□□□□□ -0.52
TM9SF4-204ENST00000442842 IKZF2Q9UKS7 526 aa11.78□□□□□ -0.52
TM9SF4-204ENST00000442842 GCN1Q92616 2671 aaKnown RBP11.78□□□□□ -0.52
TM9SF4-204ENST00000442842 A0A1W2PQL4 384 aaPredicted RBP11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 DPRXA6NFQ7 191 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 DEFB108AA8MXU0 73 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 ZNF878C9JN71 531 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 ATP6V1G2-DDX39BF2Z307 99 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 ABCD4O14678 606 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 SIAH2O43255 324 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 SYNGR3O43761 229 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 PTHP01270 115 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 SERPINA5P05154 406 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 CD3EP07766 207 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 DBHP09172 617 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 H2BFMP0C1H6 154 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 PAX7P23759 505 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 HSD11B1P28845 292 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 CALCRP30988 508 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 ACTC1P68032 377 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 ACTA1P68133 377 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 HIST1H3AP68431 136 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 RAB40BQ12829 278 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 MED21Q13503 144 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 NCMAPQ5T1S8 102 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 C1QTNF12Q5T7M4 302 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 HIST2H3PS2Q5TEC6 136 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 HIST2H2BCQ6DN03 193 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 LRRN1Q6UXK5 716 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 HIST2H3AQ71DI3 136 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 SSX6Q7RTT6 188 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 KRT77Q7Z794 578 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 PAQR4Q8N4S7 273 aaPredicted RBP11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 ZNF540Q8NDQ6 660 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 KBTBD8Q8NFY9 601 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 OR52I1Q8NGK6 324 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 OR10S1Q8NGN2 331 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 OR1F12Q8NHA8 337 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 HS3ST6Q96QI5 342 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 COQ7Q99807 217 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 PNRC2Q9NPJ4 139 aaKnown RBP11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 KCNN3Q9UGI6 736 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 EXOGQ9Y2C4 368 aaKnown RBP11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 TMEM14AQ9Y6G1 99 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 COL12A1Q99715 3063 aa11.77□□□□□ -0.53
TM9SF4-204ENST00000442842 DAPL1A0PJW8 107 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 OR6C6A6NF89 314 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 A6NNC1 897 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 PRR32B1ATL7 298 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 F5H5K5 113 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 PHYHO14832 338 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 MAGEB4O15481 346 aaPredicted RBP11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 DENRO43583 198 aaKnown RBP11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 FADS2O95864 444 aaKnown RBP11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 CRYAAP02489 173 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 OR2T7P0C7T2 308 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 ALOX5APP20292 161 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 PTAFRP25105 342 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 NR1H2P55055 460 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 GALK2Q01415 458 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 NAAAQ02083 359 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 KLHL22Q53GT1 634 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 SLC22A25Q6T423 547 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 ZNF322Q6U7Q0 402 aaPredicted RBP11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 STX19Q8N4C7 294 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 FAM169BQ8N8A8 192 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 ACBD4Q8NC06 268 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 OR1J2Q8NGS2 313 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 OR2T27Q8NH04 317 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 GGHQ92820 318 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 MNTQ99583 582 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 SCN3BQ9NY72 215 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 UBAP1Q9NZ09 502 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 POU2F3Q9UKI9 436 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 MYRFQ9Y2G1 1151 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 USP9XQ93008 2570 aaPredicted RBP11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 FREM1Q5H8C1 2179 aa11.76□□□□□ -0.53
TM9SF4-204ENST00000442842 DOPEY1Q5JWR5 2465 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 LOC100509620A0A075B734 347 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 IGHV2OR16-5A0A0B4J2B6 119 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 IRGMA1A4Y4 181 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 EFCAB10A6NFE3 127 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 ABHD16AO95870 558 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 FAM157BP0CG42 384 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 COX5BP10606 129 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 SLC15A1P46059 708 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 SLC6A9P48067 706 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 CX3CR1P49238 355 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 PRKXP51817 358 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 ZNF85Q03923 595 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 HGFACQ04756 655 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 C3orf36Q3SXR2 165 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 KCTD18Q6PI47 426 aaPredicted RBP11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 VHLLQ6RSH7 139 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 PLEKHG7Q6ZR37 379 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 TMEM200AQ86VY9 491 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 ACBD7Q8N6N7 88 aa11.75□□□□□ -0.53
TM9SF4-204ENST00000442842 ZNF283Q8N7M2 679 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms