RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 SERPINA1P01009 418 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 IGHV1-46P01743 117 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 RAC2P15153 192 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 MAKP20794 623 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 VAMP1P23763 118 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 SDHAP31040 664 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 MDH1P40925 334 aaKnown RBP6.61□□□□□ -1.35
CD44-211ENST00000442151 HTR5AP47898 357 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 SRP9P49458 86 aaKnown RBP6.61□□□□□ -1.35
CD44-211ENST00000442151 MMP15P51511 669 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 CRYBA2P53672 197 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 ACTG1P63261 375 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 ECH1Q13011 328 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 DGCR6Q14129 220 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 TMEM155Q4W5P6 130 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 C1QL2Q7Z5L3 287 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 C1orf87Q8N0U7 546 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 PAQR4Q8N4S7 273 aaPredicted RBP6.61□□□□□ -1.35
CD44-211ENST00000442151 LINC00471Q8N535 108 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 LRRC75AQ8NAA5 344 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 OR13G1Q8NGZ3 307 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 FAM216AQ8WUB2 273 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 HAVCR1Q96D42 359 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 TSPAN32Q96QS1 320 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 SOX7Q9BT81 388 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 HCAR1Q9BXC0 346 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 WNT5BQ9H1J7 359 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 NMNAT1Q9HAN9 279 aaPredicted RBP6.61□□□□□ -1.35
CD44-211ENST00000442151 IL19Q9UHD0 177 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 TMCC3Q9ULS5 477 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 POLR1DQ9Y2S0 133 aa6.61□□□□□ -1.35
CD44-211ENST00000442151 LOC100509620A0A075B734 347 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 A0A087WUU8 490 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 TEX13CA0A0J9YWL9 993 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 FAM157AC9JC47 383 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 PLPP2O43688 288 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 DOK2O60496 412 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 NCR1O76036 304 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 IGHV2-5P01817 119 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 SBK2P0C263 348 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 IRF2P14316 349 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 KITLGP21583 273 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 EPHA1P21709 976 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 GUCY1A3Q02108 690 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 MZT1Q08AG7 82 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 KRR1Q13601 381 aaKnown RBP6.6□□□□□ -1.35
CD44-211ENST00000442151 KCNJ8Q15842 424 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 SPATS1Q496A3 300 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 GLYATQ6IB77 296 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 TSPYL5Q86VY4 417 aaPredicted RBP6.6□□□□□ -1.35
CD44-211ENST00000442151 WDFY1Q8IWB7 410 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 GCDHQ92947 438 aaPredicted RBP6.6□□□□□ -1.35
CD44-211ENST00000442151 ERGIC1Q969X5 290 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 PLEKHA8Q96JA3 519 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 ZNF582Q96NG8 517 aaPredicted RBP6.6□□□□□ -1.35
CD44-211ENST00000442151 COQ7Q99807 217 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 MRI1Q9BV20 369 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 CDADC1Q9BWV3 514 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 C7orf69Q9H7B7 122 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 LPAR2Q9HBW0 351 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 SPAG4Q9NPE6 437 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 DDX28Q9NUL7 540 aaKnown RBP6.6□□□□□ -1.35
CD44-211ENST00000442151 CMTM6Q9NX76 183 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 KCNG2Q9UJ96 466 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 PURGQ9UJV8 347 aaKnown RBP6.6□□□□□ -1.35
CD44-211ENST00000442151 COL6A5A8TX70 2615 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 TRAV27A0A087WT01 109 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 UNC119BA6NIH7 251 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 PIP5K1CO60331 668 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 SLC16A7O60669 478 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 UBOX5O94941 541 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 ADRA2CP18825 462 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 SLC6A6P31641 620 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 WNT5AP41221 380 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 YAP1P46937 504 aaKnown RBP6.6□□□□□ -1.35
CD44-211ENST00000442151 CENPAP49450 140 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 GSK3BP49841 420 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 NUDT2P50583 147 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 MNAT1P51948 309 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 PSME3P61289 254 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 ERVS71-1P61550 626 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 GLO1Q04760 184 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 FMODQ06828 376 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 MALLQ13021 153 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 PSG7Q13046 419 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 ENDOGQ14249 297 aaKnown RBP6.6□□□□□ -1.35
CD44-211ENST00000442151 KCNMB1Q16558 191 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 FGD3Q5JSP0 725 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 AVPI1Q5T686 147 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 RPL13AP3Q6NVV1 102 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 ZNF774Q6NX45 483 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 JAZF1Q86VZ6 243 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 C3orf56Q8N813 242 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 ATG16L2Q8NAA4 619 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 OR2Z1Q8NG97 314 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 OR13C2Q8NGS9 318 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 OR2AJ1Q8NGZ0 328 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 OR1F12Q8NHA8 337 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 SGMS2Q8NHU3 365 aa6.6□□□□□ -1.35
CD44-211ENST00000442151 APOBEC3DQ96AK3 386 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms