RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 UBXN2BQ14CS0 331 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 DEFB133Q30KQ1 61 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 C5orf46Q6UWT4 87 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 OVCH2Q7RTZ1 564 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 KDM8Q8N371 416 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 RAB33BQ9H082 229 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 MYEF2Q9P2K5 600 aaKnown RBP14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 ZNF107Q9UII5 783 aaPredicted RBP14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 FARSAQ9Y285 508 aaKnown RBP14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 TRIOO75962 3097 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 LOC107986453A0A1B0GWG9 222 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 ACHEP22303 614 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 AGTR1P30556 359 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 ARRB1P49407 418 aaPredicted RBP14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 RAB30Q15771 203 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 ZNF546Q86UE3 836 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 BEST3Q8N1M1 668 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 BPIFB2Q8N4F0 458 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 DEFB119Q8N690 84 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 TPSD1Q9BZJ3 242 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 SHARPINQ9H0F6 387 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 OR52A1Q9UKL2 312 aa14.79□□□□□ -0.04
SEMA3B-207ENST00000441915 RHPN2P1A8MT19 583 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 ALOX12BO75342 701 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 SRSF10O75494 262 aaKnown RBP14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 ISG15P05161 165 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 HLA-DOBP13765 273 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 HOXB1P14653 301 aaPredicted RBP14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 FBLP22087 321 aaKnown RBP14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 FGL1Q08830 312 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 SCGB2B2Q4G0G5 96 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 LY6G6FQ5SQ64 297 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 DNM1P34Q6PK57 102 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 ZNF704Q6ZNC4 412 aaPredicted RBP14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 DCXRQ7Z4W1 244 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 C17orf82Q86X59 251 aaPredicted RBP14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 NKAIN3Q8N8D7 197 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 STEAP2Q8NFT2 490 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 OR1S1Q8NH92 325 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 PTX4Q96A99 478 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 MYOZ1Q9NP98 299 aaPredicted RBP14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 FBXL2Q9UKC9 423 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 SPEGQ15772 3267 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 TMEM269A0A1B0GVZ9 245 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 LDLRAD4O15165 306 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 FADS1O60427 444 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 DOK2O60496 412 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 FGF2P09038 288 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 HSD11B2P80365 405 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 SQSTM1Q13501 440 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 ATPAF1Q5TC12 328 aaPredicted RBP14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 OR10K2Q6IF99 312 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 BVESQ8NE79 360 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 G6PC2Q9NQR9 355 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 HRH3Q9Y5N1 445 aa14.78□□□□□ -0.04
SEMA3B-207ENST00000441915 CPAMD8Q8IZJ3 1885 aa14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 TRAV14DV4A0A0A6YYC5 116 aa14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 NUDT21O43809 227 aaKnown RBP14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 SDC3O75056 442 aa14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 CD74P04233 296 aa14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 LTBRP36941 435 aa14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 CAPZA1P52907 286 aa14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 MOGAT2Q3SYC2 334 aa14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 TMEM244Q5VVB8 128 aa14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 LIN54Q6MZP7 749 aa14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 HSD17B13Q7Z5P4 300 aaPredicted RBP14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 ZNF584Q8IVC4 421 aa14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 SLC26A10Q8NG04 563 aa14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 OR1J2Q8NGS2 313 aa14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 FOXRED1Q96CU9 486 aaPredicted RBP14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 MKL2Q9ULH7 1088 aa14.77□□□□□ -0.04
SEMA3B-207ENST00000441915 LOC390937A0A1W2PQ73 354 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 METTL21EPA6NDL7 271 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 TMEM235A6NFC5 223 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 A6NIZ1 184 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 ZNF735P0CB33 412 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 MGMTP16455 207 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 ZNF28P17035 718 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 RAP1BP61224 184 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 RAP1AP62834 184 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 DHRS2Q13268 280 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 NR0B2Q15466 257 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 LPCAT3Q6P1A2 487 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 PAPD4Q6PIY7 484 aaKnown RBP14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 LINC00346Q8IVM7 164 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 OR5M8Q8NGP6 311 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 TMEM234Q8WY98 164 aa14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 USB1Q9BQ65 265 aaKnown RBP14.77□□□□□ -0.05
SEMA3B-207ENST00000441915 A0A0D9SG52 128 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 OR5H14A6NHG9 310 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 OR6C76A6NM76 312 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 FTCDNL1E5RQL4 147 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 LGALS8O00214 317 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 CD8AP01732 235 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 RLN2P04090 185 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 C14orf28Q4W4Y0 310 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 C1orf100Q5SVJ3 147 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 RAB12Q6IQ22 244 aa14.76□□□□□ -0.05
SEMA3B-207ENST00000441915 TFAP2EQ6VUC0 442 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms