RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 TVP23BQ9NYZ1 205 aa4.16□□□□□ -1.74
PTPN4-206ENST00000441089 B3GAT1Q9P2W7 334 aa4.16□□□□□ -1.74
PTPN4-206ENST00000441089 CAMK2AQ9UQM7 478 aa4.16□□□□□ -1.74
PTPN4-206ENST00000441089 GPR52Q9Y2T5 361 aa4.16□□□□□ -1.74
PTPN4-206ENST00000441089 HDGFL3Q9Y3E1 203 aa4.16□□□□□ -1.74
PTPN4-206ENST00000441089 ADAM18Q9Y3Q7 739 aa4.16□□□□□ -1.74
PTPN4-206ENST00000441089 ORC6Q9Y5N6 252 aa4.16□□□□□ -1.74
PTPN4-206ENST00000441089 IER3IP1Q9Y5U9 82 aa4.16□□□□□ -1.74
PTPN4-206ENST00000441089 SPIN1Q9Y657 262 aaPredicted RBP4.16□□□□□ -1.74
PTPN4-206ENST00000441089 TENM2Q9NT68 2774 aa4.15□□□□□ -1.74
PTPN4-206ENST00000441089 IGHV3-15A0A0B4J1V0 119 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 TEX13CA0A0J9YWL9 993 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 A0A1W2PNV4 684 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 CCDC182A6NF36 153 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 FAM183AA6NL82 134 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 AQP7P3A6NL99 342 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 BLOC1S5-TXNDC5H3BN57 136 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 SULT2B1O00204 365 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 SLC1A7O00341 560 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ARPC3O15145 178 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 SMAD9O15198 467 aaKnown RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 SEC14L5O43304 696 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 TRAF3IP2O43734 574 aaPredicted RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 OR2T1O43869 369 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 XPNPEP2O43895 674 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 CXCL13O43927 109 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ENTPD6O75354 484 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 RCBTB2O95199 551 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 PMS2P2O95744 297 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 TXNDC12O95881 172 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 PLGP00747 810 aaPredicted RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 IGHMP01871 453 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 CD14P08571 375 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 RPSAP08865 295 aaKnown RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 CSF3P09919 207 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 DANCRP0C864 163 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 SMIM18P0DKX4 95 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ADORA3P0DMS8 318 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 CLUP10909 449 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 PPP3CBP16298 524 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 HIST1H1CP16403 213 aaKnown RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ENPP1P22413 925 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 SLC6A6P31641 620 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 CDKN2AP42771 156 aaKnown RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 CLK1P49759 484 aaKnown RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 CTXN1P60606 82 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 PRPS1P60891 318 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 SNRPGP62308 76 aaKnown RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 SLC35A1P78382 337 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 H3F3AP84243 136 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 SRYQ05066 204 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 PIGFQ07326 219 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 FAM27E3Q08E93 113 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ZP4Q12836 540 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 FOXF2Q12947 444 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 PMS2P3Q13401 168 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 CRMP1Q14194 572 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 MELKQ14680 651 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ALG10Q5BKT4 473 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 MESTQ5EB52 335 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 C6orf141Q5SZD1 244 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ARMC4Q5T2S8 1044 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 AADACL4Q5VUY2 407 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 HBMQ6B0K9 141 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ABLIM2Q6H8Q1 611 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 RPL13AP3Q6NVV1 102 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 SLC27A4Q6P1M0 643 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 DPY19L2P2Q6ZN68 376 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ESPNLQ6ZVH7 1005 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 H1FNTQ75WM6 255 aaPredicted RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 UBQLNLQ8IYU4 475 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 LILRB2Q8N423 598 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 SCAIQ8N9R8 606 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 CYB561A3Q8NBI2 242 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 SLC37A3Q8NCC5 494 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 NPEPL1Q8NDH3 523 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ADPRHL1Q8NDY3 354 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 SETD9Q8NE22 299 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 BBS1Q8NFJ9 593 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 OR2T33Q8NG76 320 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 OR52L1Q8NGH7 329 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 OR4K13Q8NH42 304 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 OR10D3Q8NH80 312 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 OR2V1Q8NHB1 315 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ZNF519Q8TB69 540 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 TMEM163Q8TC26 289 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 SMAP2Q8WU79 429 aaPredicted RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ZNRF4Q8WWF5 429 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 AKAP1Q92667 903 aaKnown RBP eCLIP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 PTP4A1Q93096 173 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ABTB1Q969K4 478 aaPredicted RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 FOXRED1Q96CU9 486 aaPredicted RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ZC3HAV1LQ96H79 300 aaKnown RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 WDYHV1Q96HA8 205 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 TXNDC15Q96J42 360 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 Q96M85 177 aa4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ADAD1Q96M93 576 aaKnown RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ZNF582Q96NG8 517 aaPredicted RBP4.15□□□□□ -1.75
PTPN4-206ENST00000441089 ERMAPQ96PL5 475 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms