RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 PLEKHA1Q9HB21 404 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 ATPIF1Q9UII2 106 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 KLHDC2Q9Y2U9 406 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 PCDHGA5Q9Y5G8 931 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 MED12Q93074 2177 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 A0A087WV48 116 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 PRSS37A4D1T9 235 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 FAM74A7A6NL05 159 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 H3BSH0 61 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 PLPP3O14495 311 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 AKR7A3O95154 331 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 UMODP07911 640 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 TACSTD2P09758 323 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 HLA-DOBP13765 273 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 PPP3CBP16298 524 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 FOLR3P41439 243 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 OC90Q02509 493 aaPredicted RBP12.69□□□□□ -0.38
LIMD1-202ENST00000440097 TLE3Q04726 772 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 PCOLCEQ15113 449 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 FAM74A3Q4VXF1 159 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 DCAF12Q5T6F0 453 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 OR52B4Q8NGK2 314 aa12.69□□□□□ -0.38
LIMD1-202ENST00000440097 TSPAN10Q9H1Z9 355 aaPredicted RBP12.69□□□□□ -0.38
LIMD1-202ENST00000440097 FXYD6-FXYD2A0A087WZ82 144 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 IGHV1-45A0A0A0MS14 117 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 NAP1L6A6NFF2 107 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 PRR32B1ATL7 298 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 ADAM10O14672 748 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 ECDO95905 644 aaPredicted RBP12.68□□□□□ -0.38
LIMD1-202ENST00000440097 SUMO3P55854 103 aaPredicted RBP12.68□□□□□ -0.38
LIMD1-202ENST00000440097 ODF4Q2M2E3 257 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 ZNF626Q68DY1 528 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 C5orf46Q6UWT4 87 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 GSG1LQ6UXU4 331 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 OR4K17Q8NGC6 315 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 FXYD6Q9H0Q3 95 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 TXNIPQ9H3M7 391 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 ZCCHC4Q9H5U6 513 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 NSG1A0A0A6YYJ2 146 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 NPIPA5E9PKD4 350 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 MASP2O00187 686 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 TP53I11O14683 189 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 KLF7O75840 302 aaPredicted RBP12.68□□□□□ -0.38
LIMD1-202ENST00000440097 ARL6IP5O75915 188 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 KRT33AO76009 404 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 DXOO77932 396 aaKnown RBP12.68□□□□□ -0.38
LIMD1-202ENST00000440097 PTHLHP12272 177 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 POU3F1Q03052 451 aaPredicted RBP12.68□□□□□ -0.38
LIMD1-202ENST00000440097 HES5Q5TA89 166 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 EEF1A1P5Q5VTE0 462 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 SLC35D2Q76EJ3 337 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 ZNF160Q9HCG1 818 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 KLHL9Q9P2J3 617 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 NPIPA1Q9UND3 350 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 GTF2A1LQ9UNN4 478 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 HS3ST3B1Q9Y662 390 aa12.68□□□□□ -0.38
LIMD1-202ENST00000440097 SDK2Q58EX2 2172 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 GABARAPH6UMI1 98 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 OGG1O15527 345 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 STK17BO94768 372 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 GP1BAP07359 652 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 SPARCP09486 303 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 FBXO45P0C2W1 286 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 OTX2P32243 289 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 AP3S2P59780 193 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 RPS18P62269 152 aaKnown RBP12.67□□□□□ -0.38
LIMD1-202ENST00000440097 FLI1Q01543 452 aaPredicted RBP12.67□□□□□ -0.38
LIMD1-202ENST00000440097 LIPNQ5VXI9 398 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 NAXDQ8IW45 347 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 TMEM156Q8N614 296 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 EXD3Q8N9H8 876 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 OR2Y1Q8NGV0 311 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 ELP5Q8TE02 316 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 ORAI1Q96D31 301 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 JSRP1Q96MG2 331 aaPredicted RBP12.67□□□□□ -0.38
LIMD1-202ENST00000440097 GINS4Q9BRT9 223 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 GPN1Q9HCN4 374 aaPredicted RBP12.67□□□□□ -0.38
LIMD1-202ENST00000440097 PISDQ9UG56 409 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 LOXL2Q9Y4K0 774 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 ACOD1A6NK06 481 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 ZNF98A6NK75 572 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 G3V3Y1 287 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 JMJD7P0C870 316 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 ACP1P24666 158 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 MAGEB1P43366 347 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 CBX5P45973 191 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 DEFA5Q01523 94 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 C2orf68Q2NKX9 166 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 ZNF660Q6AZW8 331 aaPredicted RBP12.67□□□□□ -0.38
LIMD1-202ENST00000440097 LRRC69Q6ZNQ3 347 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 CDH26Q8IXH8 852 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 EIF4E3Q8N5X7 224 aaKnown RBP12.67□□□□□ -0.38
LIMD1-202ENST00000440097 NSMAFQ92636 917 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 LRRC46Q96FV0 321 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 SERINC1Q9NRX5 453 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 KCNG2Q9UJ96 466 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 FBXL3Q9UKT7 428 aa12.67□□□□□ -0.38
LIMD1-202ENST00000440097 RPH3AQ9Y2J0 694 aaPredicted RBP12.67□□□□□ -0.38
LIMD1-202ENST00000440097 ZFPL1O95159 310 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms