RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 PTP4A1Q93096 173 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 MARS2Q96GW9 593 aaKnown RBP8.97□□□□□ -0.97
MCF2L-216ENST00000439475 DIRC2Q96SL1 478 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 FEVQ99581 238 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 COQ7Q99807 217 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 CADM1Q9BY67 442 aaKnown RBP8.97□□□□□ -0.97
MCF2L-216ENST00000439475 OR2J1Q9GZK6 312 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 HDHD2Q9H0R4 259 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 YAE1D1Q9NRH1 226 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 DECR2Q9NUI1 292 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 PDP1Q9P0J1 537 aaPredicted RBP8.97□□□□□ -0.97
MCF2L-216ENST00000439475 KCNG2Q9UJ96 466 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 AKAP9Q99996 3911 aa8.97□□□□□ -0.97
MCF2L-216ENST00000439475 CHD3Q12873 2000 aaKnown RBP8.97□□□□□ -0.97
MCF2L-216ENST00000439475 TACC2O95359 2948 aa8.96□□□□□ -0.97
MCF2L-216ENST00000439475 TCRBV3S1A0A5B6 114 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 VWC2LB2RUY7 222 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 DCTN6O00399 190 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 RER1O15258 196 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 FKBP6O75344 327 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 DEAF1O75398 565 aaPredicted RBP8.96□□□□□ -0.98
MCF2L-216ENST00000439475 ZNF3P17036 446 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 ACHEP22303 614 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 GIFP27352 417 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 FMO3P31513 532 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 WNT5AP41221 380 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 ZNF81P51508 661 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 MRPS11P82912 194 aaKnown RBP8.96□□□□□ -0.98
MCF2L-216ENST00000439475 ECH1Q13011 328 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 ALKBH6Q3KRA9 238 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 CCDC92Q53HC0 331 aaPredicted RBP8.96□□□□□ -0.98
MCF2L-216ENST00000439475 ZNF101Q8IZC7 436 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 SLC37A3Q8NCC5 494 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 PAPD5Q8NDF8 572 aaKnown RBP8.96□□□□□ -0.98
MCF2L-216ENST00000439475 PROKR2Q8NFJ6 384 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 SLC26A10Q8NG04 563 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 KLF14Q8TD94 323 aaPredicted RBP8.96□□□□□ -0.98
MCF2L-216ENST00000439475 NRBF2Q96F24 287 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 PITX2Q99697 317 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 BPESC1Q9GZL8 116 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 EGLN1Q9GZT9 426 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 CHODLQ9H9P2 273 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 VNN3Q9NY84 501 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 MYEF2Q9P2K5 600 aaKnown RBP8.96□□□□□ -0.98
MCF2L-216ENST00000439475 DNAJB9Q9UBS3 223 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 HIVEP1P15822 2718 aa8.96□□□□□ -0.98
MCF2L-216ENST00000439475 CR1P17927 2039 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 RIIAD1A6NNX1 92 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 A8MV72 311 aaPredicted RBP8.95□□□□□ -0.98
MCF2L-216ENST00000439475 SPRY3O43610 288 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 TIMM8AO60220 97 aaPredicted RBP8.95□□□□□ -0.98
MCF2L-216ENST00000439475 CIB2O75838 187 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 SOX14O95416 240 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 GPANK1O95872 356 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 NGFP01138 241 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 HPXP02790 462 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 HMGN1P05114 100 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 IGFBP1P08833 259 aaPredicted RBP8.95□□□□□ -0.98
MCF2L-216ENST00000439475 GAAP10253 952 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 OSMP13725 252 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 ZNF23P17027 643 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 PAICSP22234 425 aaKnown RBP8.95□□□□□ -0.98
MCF2L-216ENST00000439475 TNFSF4P23510 183 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 POU1F1P28069 291 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 GPR6P46095 362 aaPredicted RBP8.95□□□□□ -0.98
MCF2L-216ENST00000439475 CHN2P52757 468 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 SLC25A1P53007 311 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 TPTEP56180 551 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 HIST1H3AP68431 136 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 MEP1BQ16820 701 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 SPATA46Q5T0L3 261 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 HIST2H3PS2Q5TEC6 136 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 SLC27A4Q6P1M0 643 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 RFPL4BQ6ZWI9 263 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 HIST2H3AQ71DI3 136 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 ATG16L2Q8NAA4 619 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 CYB561A3Q8NBI2 242 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 DNAJC9Q8WXX5 260 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 APOBEC3DQ96AK3 386 aaPredicted RBP8.95□□□□□ -0.98
MCF2L-216ENST00000439475 ELMOD3Q96FG2 381 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 DDOQ99489 341 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 NIPSNAP1Q9BPW8 284 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 PLA2G12AQ9BZM1 189 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 FN3KQ9H479 309 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 ARMC1Q9NVT9 282 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 ZDHHC8Q9ULC8 765 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 ACANP16112 2415 aa8.95□□□□□ -0.98
MCF2L-216ENST00000439475 YLPM1P49750 1951 aaKnown RBP8.94□□□□□ -0.98
MCF2L-216ENST00000439475 A0A096LNT2 108 aa8.94□□□□□ -0.98
MCF2L-216ENST00000439475 INAFM1C9JVW0 142 aa8.94□□□□□ -0.98
MCF2L-216ENST00000439475 TFP02787 698 aa8.94□□□□□ -0.98
MCF2L-216ENST00000439475 HOXB4P17483 251 aaPredicted RBP8.94□□□□□ -0.98
MCF2L-216ENST00000439475 COL8A2P25067 703 aa8.94□□□□□ -0.98
MCF2L-216ENST00000439475 PYCR1P32322 319 aa8.94□□□□□ -0.98
MCF2L-216ENST00000439475 GRK5P34947 590 aa8.94□□□□□ -0.98
MCF2L-216ENST00000439475 CRYBB2P43320 205 aa8.94□□□□□ -0.98
MCF2L-216ENST00000439475 MAGEB1P43366 347 aa8.94□□□□□ -0.98
MCF2L-216ENST00000439475 CCL8P80075 99 aa8.94□□□□□ -0.98
MCF2L-216ENST00000439475 SLC3A1Q07837 685 aa8.94□□□□□ -0.98
MCF2L-216ENST00000439475 CRMP1Q14194 572 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms