RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 PPA1Q15181 289 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 TBCEQ15813 527 aaPredicted RBP11.06□□□□□ -0.64
SCLT1-202ENST00000439369 CDONQ4KMG0 1287 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 PABPC1L2AQ5JQF8 200 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF684Q5T5D7 378 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 CORO6Q6QEF8 472 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 TMPRSS11AQ6ZMR5 421 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 CFAP77Q6ZQR2 320 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 VASH1Q7L8A9 365 aaPredicted RBP11.06□□□□□ -0.64
SCLT1-202ENST00000439369 LINC00346Q8IVM7 164 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF679Q8IYX0 411 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 SNX33Q8WV41 574 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 HTRA1Q92743 480 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 SLAMF6Q96DU3 332 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 OR8B4Q96RC9 309 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 DCLRE1CQ96SD1 692 aaKnown RBP11.06□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF649Q9BS31 505 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 MND1Q9BWT6 205 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 WNT5BQ9H1J7 359 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 NGBQ9NPG2 151 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 PNRC2Q9NPJ4 139 aaKnown RBP11.06□□□□□ -0.64
SCLT1-202ENST00000439369 PLEK2Q9NYT0 353 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 ERVK-18Q9QC07 812 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 COPS3Q9UNS2 423 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 ERGIC3Q9Y282 383 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 KLHDC2Q9Y2U9 406 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 KLF2Q9Y5W3 355 aaPredicted RBP11.06□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF462Q96JM2 2506 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 MYO7BQ6PIF6 2116 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 CHD6Q8TD26 2715 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 MAGEA13PA6NCF6 341 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 METTL15A6NJ78 407 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 ACOD1A6NK06 481 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 TRIM64CA6NLI5 447 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 SYNGR3O43761 229 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 DOK2O60496 412 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 IGLV1-44P01699 117 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 MT-ND2P03891 347 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 SERPINA5P05154 406 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 HTR1AP08908 422 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 C21orf33P30042 268 aaPredicted RBP11.05□□□□□ -0.64
SCLT1-202ENST00000439369 OTX1P32242 354 aaPredicted RBP11.05□□□□□ -0.64
SCLT1-202ENST00000439369 RPS27P42677 84 aaKnown RBP11.05□□□□□ -0.64
SCLT1-202ENST00000439369 ETV1P50549 477 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 TUBA4AP68366 448 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 CDSNQ15517 529 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 TSC22D1Q15714 1073 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 TAB1Q15750 504 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 KRTAP27-1Q3LI81 207 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 CCDC92Q53HC0 331 aaPredicted RBP11.05□□□□□ -0.64
SCLT1-202ENST00000439369 FAM220AQ7Z4H9 259 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 KRT77Q7Z794 578 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 MDP1Q86V88 176 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 KLHL36Q8N4N3 616 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 NANOGP1Q8N7R0 232 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 IL17RDQ8NFM7 739 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 TSPAN14Q8NG11 270 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 OR10S1Q8NGN2 331 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 OR1J2Q8NGS2 313 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 OR1F12Q8NHA8 337 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 FGFBP3Q8TAT2 258 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 FCGR1BQ92637 280 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 SPTSSAQ969W0 71 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF75AQ96N20 296 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 SPENQ96T58 3664 aaKnown RBP11.05□□□□□ -0.64
SCLT1-202ENST00000439369 ATF6BQ99941 703 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 ALG8Q9BVK2 526 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 MROQ9BYG7 248 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 SLC24A3Q9HC58 644 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 NBASA2RRP1 2371 aa11.05□□□□□ -0.64
SCLT1-202ENST00000439369 HIVEP3Q5T1R4 2406 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF503-AS2A6NEH8 195 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 J3QW42 95 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 MYL12BO14950 172 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 MT-ND5P03915 603 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 H2BFMP0C1H6 154 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 EPXP11678 715 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF14P17017 642 aaPredicted RBP11.04□□□□□ -0.64
SCLT1-202ENST00000439369 CRYGSP22914 178 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 HTR5AP47898 357 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 RIDAP52758 137 aaKnown RBP11.04□□□□□ -0.64
SCLT1-202ENST00000439369 HCCSP53701 268 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 WNT4P56705 351 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 PIGFQ07326 219 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 TAF13Q15543 124 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 OTPQ5XKR4 325 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF774Q6NX45 483 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 LHFPL3Q86UP9 236 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.04□□□□□ -0.64
SCLT1-202ENST00000439369 SPARTQ8N0X7 666 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 SSC4DQ8WTU2 575 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 SMAP2Q8WU79 429 aaPredicted RBP11.04□□□□□ -0.64
SCLT1-202ENST00000439369 SGCDQ92629 289 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 DACH2Q96NX9 599 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 AMELYQ99218 206 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 TBX5Q99593 518 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 KCNJ15Q99712 375 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 CCDC90BQ9GZT6 254 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 SP140LQ9H930 580 aa11.04□□□□□ -0.64
SCLT1-202ENST00000439369 NOX3Q9HBY0 568 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms