RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 CD74P04233 296 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 ZNF735P0CB33 412 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 PTGS2P35354 604 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 OR1D4P47884 311 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 PPM1FP49593 454 aaPredicted RBP14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 C1orf140Q5VVS0 124 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 ZNF627Q7L945 461 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 EIF4E3Q8N5X7 224 aaKnown RBP14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 STK35Q8TDR2 534 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 SLC25A44Q96H78 314 aaPredicted RBP14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 ZNF587Q96SQ5 575 aaPredicted RBP14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 TBL1XR1Q9BZK7 514 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 CGGBP1Q9UFW8 167 aaPredicted RBP14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 MRPS18BQ9Y676 258 aaKnown RBP14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 ADAMTS9Q9P2N4 1935 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 A8MVM7 634 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 CDK2AP1O14519 115 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 NR0B1P51843 470 aaKnown RBP14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 EFNA3P52797 238 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 PLCXD2Q0VAA5 305 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 SHBQ15464 509 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 TTLL10Q6ZVT0 673 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 PDZD9Q8IXQ8 264 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 EDEM2Q9BV94 578 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 TINAGL1Q9GZM7 467 aaPredicted RBP14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 R4GMQ9 66 aa14.69□□□□□ -0.06
CLCNKA-203ENST00000439316 A0A1B0GTI1 187 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 TCRBV16S1A1N1A0A5B0 115 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 MEGF11A6BM72 1044 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 TRIM77I1YAP6 450 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 M0QYG6 137 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 CD8AP01732 235 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 ARRB1P49407 418 aaPredicted RBP14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 SRSF4Q08170 494 aaKnown RBP14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 PMPCAQ10713 525 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 MELKQ14680 651 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 NR0B2Q15466 257 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 ATPAF1Q5TC12 328 aaPredicted RBP14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 HLA-DQA1Q5Y7H0 255 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 OR51A2Q8NGJ7 313 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 WWTR1Q9GZV5 400 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 FSCN3Q9NQT6 498 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 HHLA2Q9UM44 414 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 ALPK2Q86TB3 2170 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 CACNA1CQ13936 2221 aa14.68□□□□□ -0.06
CLCNKA-203ENST00000439316 LOC390937A0A1W2PQ73 354 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 RHPN2P1A8MT19 583 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 ALOX12BO75342 701 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 AMY2AP04746 511 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 GIMD1P0DJR0 217 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 ACHEP22303 614 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 CRABP1P29762 137 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 GLO1Q04760 184 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 C1orf100Q5SVJ3 147 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 GRINAQ7Z429 371 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 LYPD6Q86Y78 171 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 DTWD2Q8NBA8 298 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 STEAP2Q8NFT2 490 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 OR5M8Q8NGP6 311 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 GPR119Q8TDV5 335 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 PTX4Q96A99 478 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 G6PC2Q9NQR9 355 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 SUSD2Q9UGT4 822 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 RHBDD3Q9Y3P4 386 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 LOC107986453A0A1B0GWG9 222 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 CYB5AP00167 134 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 HPP00738 406 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 RLN2P04090 185 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 ISG15P05161 165 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 UBBP0CG47 229 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 UBCP0CG48 685 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 MYF5P13349 255 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 DNASE1L1P49184 302 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 PNLIPRP2P54317 469 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 SLC26A5P58743 744 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 RPS27AP62979 156 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 UBA52P62987 128 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 CLVS2Q5SYC1 327 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 LPCAT3Q6P1A2 487 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 TMED4Q7Z7H5 227 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 ZBTB44Q8NCP5 570 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 OR1J2Q8NGS2 313 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 OR13C3Q8NGS6 347 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 ST8SIA4Q92187 359 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 MVB12AQ96EY5 273 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 CMKLR1Q99788 373 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 KLK13Q9UKR3 277 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 COA3Q9Y2R0 106 aaPredicted RBP14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 EMC9Q9Y3B6 208 aa14.67□□□□□ -0.06
CLCNKA-203ENST00000439316 ZNF736B4DX44 427 aaPredicted RBP14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 LGALS8O00214 317 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 NUDT21O43809 227 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 FADS1O60427 444 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 SPDEFO95238 335 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 MPZL1O95297 269 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 AHSA1O95433 338 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 MGMTP16455 207 aa14.66□□□□□ -0.06
CLCNKA-203ENST00000439316 ABCD3P28288 659 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms